Job Description P13035 Confidence 99.43% Date Thu Jan 5 11:33:30 GMT 2012 Rank 84 Aligned Residues 207 % Identity 20% Template c1coyA_ PDB info PDB header:oxidoreductase(oxygen receptor) Chain: A: PDB Molecule:cholesterol oxidase; PDBTitle: crystal structure of cholesterol oxidase complexed with a2 steroid substrate. implications for fad dependent alcohol3 oxidases Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	K	D	L	I	V	I	G	G	G	I	N	G	A	G	I	A	A	D	A	A	G	R	G	L	S	V	L	M	L	E	A	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	V	P	A	L	V	I	G	S	G	Y	G	G	A	V	A	A	L	R	L	T	Q	A	G	I	P	T	Q	I	V	E	M	G	R	S	W	D	T	P	G	S	D	G	K	I	F	C	G	M	L	N	P	D	K	R	S	M	W	L	A	D	K	T	D	Q	P	V	S	N	F	M	G	F	G	I	N	K	S	I
Template Known Secondary structure												S													T	T								S	S			S		S			T	T	S		S	S			S	S	S			T	T	S	B	B	S		S	B				S	S		S	B	T	T	B	S				B
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
																		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	C	A	T	S	S	A	S	S	K	L	I	H	G	G	L	R	Y	L	E	H	Y	E	F	R	L	V	S	.	.	.	.	E	A	L	A	E	R	E	V	L	L	K	M	A	P	H	I	A	F	P	M	R	F	R	L	P	H	R	P	H	L	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Conservation
Template Sequence		D	R	Y	V	G	V	L	D	S	E	R	F	S	G	I	K	V	Y	Q	G	R	G	V	G	G	G	S	L	V	N	G	G	M	A	V	T	P	K	R	N	Y	F	E	E	I	L	P	S	V	D	S	N	E	M	Y	N	K	Y	F	P	R	A	N	T	G	L	G	V	N	N	I	D	Q	A	W	F	E	S	T	E
Template Known Secondary structure					B		S							S	S								S	T	T	G	G	G	G	T	S			B														T	T	S								T										T		B											G
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.
Predicted Secondary structure																							.	.	.	.																																																.
Query SS confidence																							.	.	.	.																																																.
Query Sequence		P	A	W	M	I	R	I	G	L	F	M	Y	D	H	L	G	K	R	T	S	L	.	.	.	.	P	G	S	T	G	L	R	F	G	A	N	S	V	L	K	P	E	I	K	R	G	F	E	Y	S	D	C	W	V	D	D	A	R	L	V	L	A	N	A	Q	M	V	V	R	K	G	G	.	E	V	L	T	R	T	R
Query Conservation																							.	.	.	.																																																.
Alig confidence																							.	.	.	.																																																.
Template Conservation
Template Sequence		W	Y	K	F	A	R	T	G	R	K	T	A	Q	R	S	G	F	T	T	A	F	V	P	N	V	Y	D	F	E	Y	M	K	K	E	A	A	G	Q	V	T	K	S	G	L	G	G	E	V	I	Y	G	N	N	A	G	K	K	S	L	D	K	T	Y	L	A	Q	A	A	A	T	G	K	L	T	I	T	T	L	H	R
Template Known Secondary structure		G	G													T	T								B	S	B										T	T		S			S	T	T	T	T		S	T	T			S	S	S	B			T	T	T	T								T	T							S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure											.													.	.	.	.
Query SS confidence											.													.	.	.	.
Query Sequence		A	T	S	A	R	R	E	N	G	.	L	W	I	V	E	A	E	D	I	D	T	G	.	.	.	.	K	K	Y	S	W	Q	A	R	G	L	V	N	A	T	G	P
Query Conservation											.													.	.	.	.
Alig confidence											.													.	.	.	.
Template Conservation
Template Sequence		V	T	K	V	A	P	A	T	G	S	G	Y	S	V	T	M	E	Q	I	D	E	Q	G	N	V	V	A	T	K	V	V	T	A	D	R	V	F	F	A	A	G	S
Template Known Secondary structure									S	S	S	S										T	T	S																	S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions