Return to main results Retrieve Phyre Job Id

Job DescriptionP39309
Confidence97.34%DateThu Jan 5 11:59:12 GMT 2012
Rank15Aligned Residues80
% Identity15%Templated1rkta2
SCOP infoTetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
Predicted Secondary structure 














Query SS confidence 















































































Query Sequence  SQRLLEINHAHLQLMESLLDEGKKHNIFKPDIDPLQVNINIAALGGYYLINQHTLGLVYHISMVSPQALEARRKVIKETI
Query Conservation 
  
       
  
  

 

   
 

  

   
   
  

 
  


 

    
 
             
 
 
Alig confidence 



















































....








...











Template Conservation                   

  
   
      
    
  


  


 
  ....     
   ...       
   
Template Sequence  RQYLEKRYDLFVERFSRLLQKGIDQGEFQPVQPLATIAKFFLNXNDGIIQNA. . . . LYFDEEKAD. . . VSGLAESAKLYL
Template Known Secondary structure  TT



SS
....S

...
Template Predicted Secondary structure 







....



...
Template SS confidence 















































































   124.....130.........140.........150.........160.........170..... ....180.... .....190......
 
   95....100.
Predicted Secondary structure 


Query SS confidence 






Query Sequence  LSWLLVD
Query Conservation 
  
   
Alig confidence 






Template Conservation     
   
Template Sequence  KTVLQAD
Template Known Secondary structure  T

Template Predicted Secondary structure 


Template SS confidence 






   197..200...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions