 |
Job Description | P39309 | Confidence | 56.36% | Date | Thu Jan 5 11:59:12 GMT 2012 |
Rank | 87 | Aligned Residues | 59 |
% Identity | 3% | Template | c3qkxB_ |
PDB info |
PDB header:transcription regulator | Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator hi_0893; |
PDBTitle: crystal structure of a tetr-family transcriptional regulator (hi0893)2 from haemophilus influenzae rd at 2.35 a resolution
|
Resolution | 2.35 Å |
|
 |
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | M | E | S | L | L | D | E | G | K | K | H | N | I | F | K | P | D | I | D | P | L | Q | V | N | I | N | I | A | A | L | G | G | Y | Y | L | I | N | Q | H | T | L | G | L | V | Y | H | I | S | M | V | S | P | Q | A | L | E | A | R | R |
Query Conservation |   |
  |
|   |   |
|
|   |
|
|   |   |   |
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |
|
|
|   |
|
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
Template Sequence |   |
R | W | D | L | F | C | H | Q | A | Q | K | A | G | L | L | A | E | . |
L | S | E | D | I | L | F | L | L | S | L | K | T | A | I | N | L | A | S | D | A | K | F | I | D | F | D | L | K | P | E | I | L | E | S | V | I | E | R | S | W | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T |
| B |
| S | . | S |
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
. | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|