Job Description P39309 Confidence 89.16% Date Thu Jan 5 11:59:12 GMT 2012 Rank 74 Aligned Residues 77 % Identity 18% Template c3he0A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: the structure of a putative transcriptional regulator tetr family2 protein from vibrio parahaemolyticus. Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	S	Q	R	L	L	E	I	N	H	A	H	L	Q	L	M	E	S	L	L	D	E	G	K	K	H	N	I	F	K	P	D	I	D	P	L	Q	V	N	I	N	I	A	A	L	G	G	Y	Y	L	I	N	Q	H	T	L	G	L	V	Y	H	I	S	M	V	S	P	Q	A	L	E	A	R	R	K	V	I	K	E
Query Conservation
Alig confidence																																		.																		.	.	.	.	.
Template Conservation																																		.																		.	.	.	.	.
Template Sequence		T	T	R	N	K	T	W	E	L	E	R	K	X	F	A	Q	V	D	R	L	F	N	Q	G	K	E	E	G	V	F	K	P	.	L	D	N	E	V	L	S	G	L	S	F	E	A	S	V	A	L	.	.	.	.	.	A	R	K	H	A	L	G	F	Y	Q	L	D	D	D	A	L	E	A	A	I	E	A	S	W	D
Template Known Secondary structure														T	T													T	T		B		S	.										T								.	.	.	.	.						T	T	S
Template Predicted Secondary structure																																		.																		.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		93	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	I
Template Known Secondary structure				B
Template Predicted Secondary structure
Template SS confidence
		189	190	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions