Job Description P39309 Confidence 78.19% Date Thu Jan 5 11:59:12 GMT 2012 Rank 84 Aligned Residues 79 % Identity 8% Template c3ccyA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of a tetr-family transcriptional regulator from2 bordetella parapertussis 12822 Resolution 2.01 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	L	E	I	N	H	A	H	L	Q	L	M	E	S	L	L	D	E	G	K	K	H	N	I	F	K	P	D	I	D	P	L	Q	V	N	I	N	I	A	A	L	G	G	Y	Y	L	I	N	Q	H	T	L	G	L	V	Y	H	I	S	M	V	S	P	Q	A	L	E	A	R	R	K	V	I	K	E	T	I	L
Query Conservation
Alig confidence																															.														.	.	.	.	.	.	.	.	.
Template Conservation																															.														.	.	.	.	.	.	.	.	.
Template Sequence		K	A	L	I	A	K	Q	R	E	L	I	A	Y	V	R	D	A	L	L	Q	L	R	P	D	X	A	A	N	R	.	T	L	A	H	V	D	T	X	L	F	F	G	X	.	.	.	.	.	.	.	.	.	I	N	W	T	Y	T	W	Y	K	A	D	G	S	V	S	P	D	A	L	A	E	R	T	V	Q	L	F	L
Template Known Secondary structure																								G	G	G	T	T			.														.	.	.	.	.	.	.	.	.			G	G	G	G	T			T	T	S	S	S
Template Predicted Secondary structure																															.														.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.										.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		96	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	L	L	V	D	P	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	Y	L	N	L	L	S	A
Template Known Secondary structure				G	G	G
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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