Job Description P39309 Confidence 96.36% Date Thu Jan 5 11:59:12 GMT 2012 Rank 32 Aligned Residues 81 % Identity 14% Template c3bhqB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of a putative tetr-family transcriptional regulator2 (mlr_4833) from mesorhizobium loti maff303099 at 1.54 a resolution Resolution 1.54 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	L	E	I	N	H	A	H	L	Q	L	M	E	S	L	L	D	E	G	K	K	H	N	I	F	K	P	D	I	D	P	L	Q	V	N	I	N	I	A	A	L	G	G	Y	Y	L	I	N	Q	H	T	L	G	L	V	Y	H	I	S	M	V	S	P	Q	A	L	E	A	R	R	K	V	I	K	E	T	I	L
Query Conservation
Alig confidence																																.																								.	.	.
Template Conservation																																.																								.	.	.
Template Sequence		A	W	Y	E	K	G	F	E	R	X	L	A	S	T	A	S	C	F	Q	K	L	T	N	R	G	L	I	Q	T	G	.	D	P	Y	L	A	A	S	H	L	F	G	X	L	L	W	I	P	X	N	E	A	X	F	.	.	.	T	G	S	N	R	R	S	K	A	E	L	E	R	H	A	D	A	S	V	E	A	F	L
Template Known Secondary structure							T																		T	T	S	B			S	.	S																							.	.	.		T	S
Template Predicted Secondary structure																																.																								.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		96	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	L	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	Y	G	V
Template Known Secondary structure					B
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions