Job Description P39309 Confidence 88.92% Date Thu Jan 5 11:59:12 GMT 2012 Rank 75 Aligned Residues 80 % Identity 19% Template c3b81A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, acrr family; PDBTitle: crystal structure of predicted dna-binding transcriptional regulator2 of tetr/acrr family (np_350189.1) from clostridium acetobutylicum at3 2.10 a resolution Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	L	E	I	N	H	A	H	L	Q	L	M	E	S	L	L	D	E	G	K	K	H	N	I	F	K	P	D	I	D	P	L	Q	V	N	I	N	I	A	A	L	G	G	Y	Y	L	I	N	Q	H	T	L	G	L	V	Y	H	I	S	M	V	S	P	Q	A	L	E	A	R	R	K	V	I	K	E	T	I	L
Query Conservation
Alig confidence																															.																								.	.	.	.	.	.	.	.
Template Conservation																															.																								.	.	.	.	.	.	.	.
Template Sequence		K	L	X	V	A	I	I	K	Y	F	A	P	I	Y	A	D	I	I	S	Q	G	N	E	E	G	V	F	K	V	.	K	Y	P	L	E	T	A	E	I	I	L	T	L	S	H	F	Y	L	D	E	D	L	F	.	.	.	.	.	.	.	.	K	W	K	K	E	D	X	S	L	K	L	T	A	F	K	E	T	L	I
Template Known Secondary structure																										T	S				.	S															T	T	T						.	.	.	.	.	.	.	.	T			G	G	G
Template Predicted Secondary structure																															.																								.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	L	L	V	D	P	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	L	D	A	D	E	D	T
Template Known Secondary structure					T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions