Job Description P39309 Confidence 95.78% Date Thu Jan 5 11:59:12 GMT 2012 Rank 42 Aligned Residues 79 % Identity 13% Template c2uxoB_ PDB info PDB header:transcription Chain: B: PDB Molecule:hth-type transcriptional regulator ttgr; PDBTitle: ttgr in complex with tetracycline Resolution 2.7 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	L	E	I	N	H	A	H	L	Q	L	M	E	S	L	L	D	E	G	K	K	H	N	I	F	K	P	D	I	D	P	L	Q	V	N	I	N	I	A	A	L	G	G	Y	Y	L	I	N	Q	H	T	L	G	L	V	Y	H	I	S	M	V	S	P	Q	A	L	E	A	R	R	K	V	I	K	E	T	I	L
Query Conservation
Alig confidence																																																					.	.	.	.	.									.	.	.
Template Conservation																																																					.	.	.	.	.									.	.	.
Template Sequence		Q	Q	R	Q	S	A	V	L	D	C	H	K	G	I	T	L	A	L	A	N	A	V	R	R	G	Q	L	P	G	E	L	D	A	E	R	A	A	V	A	M	F	A	Y	V	D	G	L	I	R	R	W	.	.	.	.	.	L	L	L	P	D	S	V	D	.	.	.	L	L	G	D	V	E	K	W	V	D	T	G	L
Template Known Secondary structure																									T	T	S	S		S	S																						.	.	.	.	.				G	G	G			.	.	.	T	T	T	T
Template Predicted Secondary structure																																																					.	.	.	.	.									.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.						.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.
		96	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	L	L	V	D	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	M	L	R	L	S	P
Template Known Secondary structure								G
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions