Return to main results Retrieve Phyre Job Id

Job DescriptionP39309
Confidence87.43%DateThu Jan 5 11:59:12 GMT 2012
Rank79Aligned Residues72
% Identity11%Templatec2nx4A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:transcriptional regulator, tetr family protein; PDBTitle: the crystal structure of athe putative tetr-family transcriptional2 regulator rha06780 from rhodococcus sp. rha1.
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90..
Predicted Secondary structure 














Query SS confidence 













































































Query Sequence  SQRLLEINHAHLQLMESLLDEGKKHNIFKPDIDPLQVNINIAALGGYYLINQHTLGLVYHISMVSPQALEARRKVIKE
Query Conservation 
  
       
  
  

 

   
 

  

   
   
  

 
  


 

    
 
             
 
Alig confidence 





























.












.....




























Template Conservation                    
           .             .....  
                    
   
 
Template Sequence  AATNRRTMDNWREQMAIFLEQAREEGSVGD. IDVTIVVEQLLNM. . . . . MMGMQILGVLTPGETSSERQLEMLEQFVA
Template Known Secondary structure  TSS
S.

.....
TTTT
Template Predicted Secondary structure 





.

.....





Template SS confidence 













































































   120.........130.........140......... 150.........160.. .......170.........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions