Job Description P39309 Confidence 94.18% Date Thu Jan 5 11:59:12 GMT 2012 Rank 59 Aligned Residues 77 % Identity 19% Template c1vi0B_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of a transcriptional regulator Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	L	E	I	N	H	A	H	L	Q	L	M	E	S	L	L	D	E	G	K	K	H	N	I	F	K	P	D	I	D	P	L	Q	V	N	I	N	I	A	A	L	G	G	Y	Y	L	I	N	Q	H	T	L	G	L	V	Y	H	I	S	M	V	S	P	Q	A	L	E	A	R	R	K	V	I	K	E	T	I	L
Query Conservation
Alig confidence																																																					.	.	.	.	.									.	.	.
Template Conservation																																																					.	.	.	.	.									.	.	.
Template Sequence		Q	K	I	N	E	I	L	K	G	Y	L	N	I	L	D	G	I	L	T	E	G	I	Q	S	G	E	I	K	E	G	L	D	V	R	L	A	R	Q	X	I	F	G	T	I	D	E	T	V	T	T	W	.	.	.	.	.	V	X	N	D	Q	K	Y	D	.	.	.	L	V	A	L	S	N	S	V	L	E	L	L	V
Template Known Secondary structure																										T	S	S		T	T																						.	.	.	.	.			T	T	T		S		.	.	.	T	G	G	G
Template Predicted Secondary structure																																																					.	.	.	.	.									.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.
		96	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	L	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	I	H	N
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions