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Job DescriptionP39309
Confidence98.47%DateThu Jan 5 11:59:12 GMT 2012
Rank5Aligned Residues95
% Identity15%Templatec1pb6D_
PDB info PDB header:transcriptionChain: D: PDB Molecule:hypothetical transcriptional regulator ycdc; PDBTitle: crystal structure of hypothetical transcriptional regulator ycdc
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  SENQSKGVHYAKSQRLLEINHAHLQLMESLLDEGKKHNIFKPDIDPLQVNINIAALGGYYLINQHTLGLVYHISMVSPQA
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Template Sequence  MEMLAGAPLLMD. . ELTGDLKALIDEKSALIAGWVKSGKLAP. IDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVF
Template Known Secondary structure  TT
TTT..TTTSS
S.

TS

TTS
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   116...120....... ..130.........140.........150..... ....160.........170.........180.........190..
 
   83......90.........100
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Query Sequence  LEARRKVIKETILSWLLV
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Template Sequence  FNQTVENVQRIIIEGIRP
Template Known Secondary structure  S
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   193......200.........210
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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