Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA47
Confidence96.31%DateThu Jan 5 11:11:54 GMT 2012
Rank7Aligned Residues417
% Identity10%Templated2a65a1
SCOP infoSNF-like SNF-like SNF-like
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30..... ....40.........50.........60. ........70......... 80.........90....
Predicted Secondary structure 
.


.



..

Query SS confidence 
















.

























.

















. .














Query Sequence  TLVPVVMMGLAYMQPMT. LFDTFGIVSGLTDGHVPTAYAFALIA. ILFTALSYGKLVRRYPSA. . GSAYTYAQKSISPTV
Query Conservation               

 
.
           
        
  
 .         

    
  ..

 
       
   
Alig confidence 
















.

























.

















..














Template Conservation 
   



  
 












   


 





   
   




 

  


                    
 
Template Sequence  TRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGHGTTPAIFYLLWRNRF
Template Known Secondary structure 
SSTTTTTTTT

SS
S
Template Predicted Secondary structure 














Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70.........80.........
 
   95....100.........110.........120.........130 ..
Predicted Secondary structure 



..........................................
Query SS confidence 



































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

Query Sequence  GFMVGWSSLLDYLFAPMINILLAKIYFEALVPSIPS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WM
Query Conservation                            
         ..........................................  
Alig confidence 



































..........................................

Template Conservation    


         
  

 

  
 
 
   
    


                                        
Template Sequence  AKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPPTDPDSILRPFKEFLYSYIGVPKGDEPILKPSLFAYIV
Template Known Secondary structure  TT








T

SSSS
B



Template Predicted Secondary structure 





























Template SS confidence 















































































   90.........100.........110.........120.........130.........140.........150.........160.........
 
   133......140.........150.........160.........170.........180 .........190.........200.........210
Predicted Secondary structure 




..



















Query SS confidence 















































. .





























Query Sequence  FVVALVAFMTAFNLRSLKSVANFNTVIVVLQVVLIAVILGMVVYGVFE. . GEGAGTLASTRPFWSGDAHVIPMITGATIL
Query Conservation             
                       
            ..                              
Alig confidence 















































..





























Template Conservation            

     


   


           
 
          

  
      
  
 
    

  
  
 
Template Sequence  FLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIAAVGQI
Template Known Secondary structure  TT
TTTTTT
TTS

TTSTT
Template Predicted Secondary structure 











Template SS confidence 















































































   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   211... .....220.........230.........240....... ..250.........260.........270....... ..280
Predicted Secondary structure 

.


.......







..
Query SS confidence 



.
































. . . . . . .





























. .


Query Sequence  CFSF. TGFDGISNLSEETKDAERVIPRAIFLTALIGGM. . . . . . . IFIFATYFLQLYFPDISRFKDPDASQPEIM. . LYV
Query Conservation      . 
         
   
 
  
 
          ....... 
                            ..   
Alig confidence 



.
































.......





























..


Template Conservation 






 
     


     
    
  
       


    
                     
  
 

  
   
Template Sequence  FFTLSLGFGAIITYASYVRKDQDIVLSGLTAATLNEKAEVILGGSISIPAAVAFFGVANAVAIAKAGAFNLGFITLPAIF
Template Known Secondary structure  TTTSSTTS
TTS

TT

SST
Template Predicted Secondary structure 





















Template SS confidence 















































































   252.......260.........270.........280.........290.........300.........310.........320.........330.
 
   281........290.........300.........310.........320.........330.........340.........350.........360
Predicted Secondary structure 
















Query SS confidence 















































































Query Sequence  AGKAFQVGALIFSTITVLASGMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWRTPAMNIILVGAIALLAINFDLVMATA
Query Conservation                              

     
 
  

             
  

                    
Alig confidence 








































.......































Template Conservation 
 

    
  



 
 
 

 
     
 

  
 
 
 .......  
             
  
      
    
Template Sequence  SQTAGGTFLGFLWFFLLFFAGLTSSIAIMQPMIAFLEDELK. . . . . . . LSRKHAVLWTAAIVFFSAHLVMFLNKSLDEMD
Template Known Secondary structure  TTSTTTS
.......

BTT
Template Predicted Secondary structure 




.......




Template SS confidence 















































































   332.......340.........350.........360.........370.. .......380.........390.........400....
 
   361........370.........380 .........390.........400.........410........
Predicted Secondary structure  ............












..........
Query SS confidence 



















. . . . . . . . . . . .





































. . . . . . . . . .
Query Sequence  LINFGALVAFTFVNLSVISQ. . . . . . . . . . . . FWIREKRNKTLKDHFQYLFLPMCGALTVGALWVNLEES. . . . . . . . . .
Query Conservation                
  
  ............                      
               ..........
Alig confidence 



















............





































..........
Template Conservation         
    
 
 
 
 



  
   

  
 
             
 
  
  


                   
Template Sequence  FWAGTIGVVFFGLTELIIFFWIFGADKAWEEINRGGIIKVPRIYYYVMRYITPAFLAVLLVVWAREYIPKIMEETHWTVW
Template Known Secondary structure  TTTTTS
TT
SS


TTTSS
TT
Template Predicted Secondary structure 
















Template SS confidence 















































































   405....410.........420.........430.........440.........450.........460.........470.........480....
 
   419420.........430.........440..
Predicted Secondary structure  ..
Query SS confidence  . .























Query Sequence  . . SMVLGLIWAAIGLIYLACVTKSFR
Query Conservation  ..          

        
   
Alig confidence  ..























Template Conservation        

          
       
Template Sequence  ITRFYIIGLFLFLTFLVFLAERRRNH
Template Known Secondary structure 
Template Predicted Secondary structure 







Template SS confidence 

























   485....490.........500.........510
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions