Job Description P0AA47 Confidence 2.08% Date Thu Jan 5 11:11:54 GMT 2012 Rank 46 Aligned Residues 78 % Identity 8% Template d1iwga7 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.					430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		V	N	L	S	V	I	S	Q	F	W	I	R	E	K	R	N	K	T	L	K	D	H	F	Q	Y	L	F	L	P	M	C	G	A	L	T	V	G	A	L	W	V	N	L	E	E	S	S	M	V	L	G	L	I	W	A	A	I	.	.	.	.	G	L	I	Y	L	A	C	V	T	K	S	F	R	N	P	V	P	Q	Y
Query Conservation																																																											.	.	.	.
Alig confidence																																																											.	.	.	.
Template Conservation
Template Sequence		I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V	E	N	V	E	R	V	M	A	E	E	G	L	P	P
Template Known Secondary structure											T	T				T	T	T	T	T																			T	T	T			S																																	T	S			S
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		449	450
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		428	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions