Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA47
Confidence2.60%DateThu Jan 5 11:11:54 GMT 2012
Rank29Aligned Residues50
% Identity10%Templatec1ciiA_
PDB info PDB header:transmembrane proteinChain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30. ........40.........50.........60........
Predicted Secondary structure 
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Query Sequence  TLVPVVMMGLAYM. QPMTLFDTFGIVSGLTDGHVPTAYAFALIAILFTALS
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Template Conservation 
                                                  
Template Sequence  ENWRPLFVKTETIIAGNAATALVALVFSILTGSALGIIGYGLLMAVTGALI
Template Known Secondary structure  TT
TTTBTT
BTT


Template Predicted Secondary structure 



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   562.......570.........580.........590.........600.........610..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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