Return to main results Retrieve Phyre Job Id

Job DescriptionP31058
Confidence99.72%DateThu Jan 5 11:46:54 GMT 2012
Rank13Aligned Residues143
% Identity21%Templated2uy6b1
SCOP infoCommon fold of diphtheria toxin/transcription factors/cytochrome f Bacterial adhesins Pilus subunits
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   244.....250.........260.........270.........280.. .......290.........300.........310.........320.
Predicted Secondary structure 




















..





















Query SS confidence 






































. .






































Query Sequence  LNNVKLTLPTCFTSILTGPSVNGSTVRMGEYSSGTIKNG. . ASPVPFDISLQNCIRVRNIETKLVTGKVGTQNTQLLGNT
Query Conservation       
  



   
    

  

 

    
 
   ..





 
 



       
 
         
 

 
 
Alig confidence 














....



















..






































Template Conservation   
 
 
   

 
  ....      
 

 
               
 
 
  
                 
        
Template Sequence  TFNNTVVDAPCSISQ. . . . KSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKGGKGTVKLAFTGPIVNGHSD
Template Known Secondary structure 











....SSTT








T




SS

TTTB



S

TT
Template Predicted Secondary structure 



....
































Template SS confidence 















































































   12.......20...... ...30.........40.........50.........60.........70.........80.......
 
   322.......330.........340.........350.........360.........370.........380.........390.. .......
Predicted Secondary structure 




















































..


Query SS confidence 






































































. .






Query Sequence  LTGSTAAKGVGVLIEGLATSKNPLMTLKPNDTNSVYIDYETEDDTSDGVYPNQGNGTSQPLHFQATLKQDG. . NIAIEPG
Query Conservation    

  





 
     
      
 
    
                          
 





 

..  




Alig confidence 




















.....................




























..






Template Conservation        
 



 
       .....................                    
 
           
  
Template Sequence  ELDTNGGTGLAIVVQGAGKNV. . . . . . . . . . . . . . . . . . . . . VFDGSEGDANTLKDGENVLHYTAVVKKSSAVGAAVTEG
Template Known Secondary structure 
BSSS

SSSB
.....................



TT
B
SS



STT



SS
Template Predicted Secondary structure 










.....................


















Template SS confidence 















































































   92.......100.........110.. .......120.........130.........140.........150
 
   400.........410.
Predicted Secondary structure 
Query SS confidence 











Query Sequence  EFKATSTFQVTY
Query Conservation   
 
 






Alig confidence 











Template Conservation     
  
  
 
Template Sequence  AFSAVANFNLTY
Template Known Secondary structure 

B


Template Predicted Secondary structure 
Template SS confidence 











   151........160..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions