|   |
252 | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | |
. | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | T | C | F | T | S | I | L | T | G | P | S | V | N | G | S | T | V | R | M | G | E | Y | S | S | G | T | I | K | . |
N | G | A | S | P | V | P | F | D | I | S | L | Q | N | C | I | R | V | R | N | I | E | T | K | L | V | T | G | K | V | G | T | Q | N | T | Q | L | L | G | N | T | L | T | G | S | T | A | A | K | G |
Query Conservation |   |
|
|
|
|   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |
|   |
|   | . |   |   |
|
|
|
|
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |
|
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
| . | . | . | . | . | . | . | . |
|   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |
|
|   |
|
|   |   |
|
Template Sequence |   |
P | A | C | T | V | . |
. |
. |
. |
. |
. |
. |
. |
S | N | T | T | V | D | W | Q | D | V | E | I | Q | T | L | S | Q | N | G | N | H | E | K | E | F | T | V | N | X | R | C | P | Y | N | L | G | T | X | K | V | T | I | T | A | T | N | T | Y | N | N | A | . |
. |
. |
I | L | V | Q | N | T | S | N | T | S | S | D | G |
Template Known Secondary structure |   |
|
|
|  |  | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| G | G | G |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |
| S |
|
|
| S |
|  |  |  |  |  |  |
| S | S |  |  | T | T |  | . | . | . |  |  |
| T | T |
| B | S | S | T | T |
|  |
Template Predicted Secondary structure |   |
|
|  |  |  | . | . | . | . | . | . | . | . |
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . |
|
|
|
|  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
|
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
331 | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | V | L | I | E | G | L | A | T | S | K | N | P | L | M | T | L | K | P | N | D | T | N | S | V | Y | I | D | Y | E | T | E | D | D | T | S | D | G | V | Y | P | N | Q | G | N | G | T | S | Q | P | L | H | F | Q | A | T | L | K | Q | D | G | N | I | A | I | E | P | G | E | F | K | A | T | S | T | F | Q | V | T |
Query Conservation |   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|
|   |   |
|
|
|
|
|   |
|   |
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |
|   |   |
|   |
|   |
|
|
|
|
|   |
|   |
Template Sequence |   |
L | L | V | Y | L | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | S | N | A | G | N | I | G | T | A | I | T | L | G | T | P | F | T | P | G | K | I | T | G | N | N | A | D | K | T | I | S | L | H | A | K | L | G | Y | K | G | N | X | Q | N | L | I | A | G | P | F | S | A | T | A | T | L | V | A | S |
Template Known Secondary structure |   |
 |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  | T | T |  |  |  |  |  |
|
| T | T | S |
| B |
|
| S |
|  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| G | G | G | B |
|
| S |
|
|
|
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
  |
  |   |
411 |
Predicted Secondary structure |   |
|
Query SS confidence |   |
|
Query Sequence |   |
Y |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
Y |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
148 |
  |