 |
Job Description | P31058 | Confidence | 2.32% | Date | Thu Jan 5 11:46:54 GMT 2012 |
Rank | 87 | Aligned Residues | 58 |
% Identity | 21% | Template | c3hwjA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:e3 ubiquitin-protein ligase mycbp2; |
PDBTitle: crystal structure of the second phr domain of mouse myc-2 binding protein 2 (mycbp-2)
|
Resolution | 2.25 Å |
|
 |
  |   |
211 | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | L | S | S | S | S | N | Y | L | Y | S | F | K | A | Y | S | P | G | T | K | V | V | D | H | S | N | H | I | Y | V | N | F | T | L | N | N | V | K | L | T | L | P | T | C | F | T | S | I | L | T | G | P | S | V | N | G | S | T | V | R | M | G | E | Y |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |   |   |
|
|
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|
|   |
|   |
|   |   |
|   |   | . | . | . | . | . | . |
|
|
|
|
|   |
|   |   |
|
|
|
Template Sequence |   |
V | V | P | L | K | E | N | V | K | Y | A | V | R | L | R | N | Y | G | S | R | T | A | N | G | D | G | G | X | T | T | V | Q | C | P | D | G | V | T | F | T | F | S | T | C | S | L | . |
. |
. |
. |
. |
. |
S | S | N | G | T | N | Q | T | R | G | Q | I |
Template Known Secondary structure |   |
 |  |  |
|
| T | T |
|
|  |  |  |  |  |  |  |  | S | S |
| B |
|
|  |  |  |  |
| S |  |  |  |
| T | T | S |
|  |  |  |  |  |
|
| T | T | . | . | . | . | . | . |
|
| S | S |
|
| S | S | S | B | S |
|
Template Predicted Secondary structure |   |
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1817 | . | . | 1820 | . | . | . | . | . | . | . | . | . | 1830 | . | . | . | . | . | . | . | . | . | 1840 | . | . | . | . | . | . | . | . | . | 1850 | . | . | . | . | . | . | . | . | . | 1860 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 1870 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|