Return to main results Retrieve Phyre Job Id

Job DescriptionP31058
Confidence2.44%DateThu Jan 5 11:46:54 GMT 2012
Rank78Aligned Residues60
% Identity8%Templatec3e8vA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:possible transglutaminase-family protein; PDBTitle: crystal structure of a possible transglutaminase-family2 protein proteolytic fragment from bacteroides fragilis
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   122.......130.........140.........150.........160.........170.........180.
Predicted Secondary structure 







































Query SS confidence 



























































Query Sequence  VPGLYYTMLISRVWSAYDTITDIQSPGIYIGDPSNQEFFFSVTDSDLQTKGCNKADDYDK
Query Conservation 


 

                                                      
Alig confidence 



























































Template Conservation 
 

 
 
 






  

   

  
 
 
 

 


 
 
   
  
 
        
Template Sequence  VADATVEFKVYNYAEFYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSKLSFGKDN
Template Known Secondary structure 
TT
TT

TTS

STTTTB
Template Predicted Secondary structure 
















Template SS confidence 



























































   303......310.........320.........330.........340.........350.........360..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions