Job Description P31058 Confidence 2.67% Date Thu Jan 5 11:46:54 GMT 2012 Rank 73 Aligned Residues 67 % Identity 4% Template c3cjiA_ PDB info PDB header:virus Chain: A: PDB Molecule:polyprotein; PDBTitle: structure of seneca valley virus-001 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	T	I	T	D	I	Q	S	P	G	I	Y	I	G	D	P	S	N	Q	E	F	F	F	S	V	T	D	S	D	L	Q	T	K	G	C	N	K	A	D	D	Y	D	K	F	W	A	I	G	G	I	V	H	N	I	T	V	E	F	Y	T	D	T	N	F	D	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	W	N	S	V	S	S	V	L	P	V	R	W	G	G	A	S	K	L	S	S	A	T	R	G	L	P	A	H	A	D	W	G	T	I	Y	A	F	V	P	R	P	N	E	K	K	S	T	A	V	K	H	V	A	V	Y	I	R	Y	K	N	A	R	A	W	C	P
Template Known Secondary structure					S	S	S	S	S			S	S					S	S	S	S	S			T	T			S	S		S	S								S	S		G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions