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Job DescriptionP31058
Confidence99.70%DateThu Jan 5 11:46:54 GMT 2012
Rank14Aligned Residues120
% Identity20%Templatec2w07B_
PDB info PDB header:cell adhesionChain: B: PDB Molecule:minor pilin subunit papf; PDBTitle: structural determinants of polymerization reactivity of the2 p pilus adaptor subunit papf
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   248.250.........260.........270.........280.........290.........300.........310.........320.......
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Query Sequence  KLTLPTCFTSILTGPSVNGSTVRMGEYSSGTIKNGASPVPFDISLQNCIRVRNIETKLVTGKVGTQNTQLLGNTLTGSTA
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Template Sequence  NVYIPPCTIN. . NGQ. . . NIVVDFGNINPEHVDNSRGEVTKTISISCPY. . GSLWIKVTGNTMGGGQNNVL. . . . . . ATN
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B
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   910........ .20. ........30.........40.........50.. .......60.........70.. ...
 
   328.330.........340.........350.........360.........370.........380.........390.........400.......
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Query Sequence  AKGVGVLIEGLATSKNPLMTLKPNDTNSVYIDYETEDDTSDGVYPNQGNGTSQPLHFQATLKQDGNIAIEPGEFKATSTF
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Template Sequence  ITHFGIALYQGKGMSTPL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TLRSTFTFTSVPFRNGSGILNGGDFRTTASM
Template Known Secondary structure  STTSSSSSSB
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   78.80.........90..... ....100.........110.........120......
 
   408.410.
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Query Sequence  QVTY
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Template Sequence  SMIY
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   144...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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