Job Description P31058 Confidence 3.27% Date Thu Jan 5 11:46:54 GMT 2012 Rank 57 Aligned Residues 85 % Identity 9% Template c1nkgA_ PDB info PDB header:lyase Chain: A: PDB Molecule:rhamnogalacturonase b; PDBTitle: rhamnogalacturonan lyase from aspergillus aculeatus Resolution 1.50 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		V	F	Y	K	P	T	Q	L	G	P	T	G	V	K	M	Y	W	S	Y	L	D	T	G	T	G	G	G	I	L	Y	C	N	T	S	G	R	A	N	P	G	P	I	T	I	E	N	A	M	V	Y	S	G	K	D	Y	G	G	H	K	L	F	N	T	S	V	P	G	L	Y	.	Y	T	M	L	I	S	R	V	W	S
Query Conservation																																																																							.
Alig confidence														.	.	.														.	.	.	.															.	.	.	.																				.
Template Conservation														.	.	.														.	.	.	.															.	.	.	.
Template Sequence		I	I	H	Y	G	T	E	L	Q	Y	S	S	.	.	.	Q	G	S	H	I	G	S	G	L	G	S	A	T	.	.	.	.	V	T	A	T	Q	S	G	D	Y	I	K	V	T	C	.	.	.	.	V	T	D	T	L	T	Q	Y	M	V	V	H	N	G	D	P	I	I	H	M	A	T	Y	I	T	A	E	P	S	I
Template Known Secondary structure					T	T				B		S	S	.	.	.	S		B			T	T			S	S			.	.	.	.							T	T							.	.	.	.			S	S									T	T											S	S			T	T
Template Predicted Secondary structure														.	.	.														.	.	.	.															.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	D	T	I	T	D	I	Q	S	P	G	I	Y	I	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	L	R	F	I	A	R	L	N	S	D	L	L	P	N	E
Template Known Secondary structure		S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions