Job Description P37661 Confidence 100.00% Date Thu Jan 5 11:56:34 GMT 2012 Rank 3 Aligned Residues 308 % Identity 15% Template c3lxqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein vp1736; PDBTitle: the crystal structure of a protein in the alkaline2 phosphatase superfamily from vibrio parahaemolyticus to3 1.95a Resolution 1.95 Å

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		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		A	L	G	L	Y	A	W	A	R	V	D	E	S	S	D	N	N	S	L	L	N	P	A	K	K	F	T	Y	Q	A	P	Q	N	V	D	D	T	Y	V	V	F	I	I	G	E	T	T	R	W	D	H	M	G	I	F	G	Y	E	R	N	T	T	P	K	L	A	Q	E	.	.	K	N	L	A	A	F	R	G	Y	S
Query Conservation																																																																						.	.
Alig confidence																																																										.												.	.
Template Conservation																																																										.
Template Sequence		N	Q	K	X	L	D	L	V	R	A	S	S	T	K	I	D	F	D	P	T	L	L	P	T	X	N	S	N	P	A	T	Y	Q	G	K	R	K	N	L	V	I	L	L	Q	E	S	L	G	A	Q	F	V	G	S	L	G	.	G	L	P	L	T	P	N	L	D	E	L	X	Q	E	G	W	Q	F	T	Q	X	Y	A
Template Known Secondary structure																S		B		T	T	T	S	T	T							S			S	S										T	T			G	G	G		G	G	G	T	.	S		S										T	T	S				T	T
Template Predicted Secondary structure																																																										.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.						.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.						.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.																													.	.	.	.	.
Query SS confidence																															.	.	.	.	.																													.	.	.	.	.
Query Sequence		C	D	T	A	T	K	L	S	L	R	C	M	F	V	R	Q	G	G	A	E	D	N	P	Q	R	T	L	K	E	.	.	.	.	.	Q	N	I	F	A	V	L	K	Q	L	G	F	S	S	D	L	Y	A	M	Q	S	E	M	W	F	Y	S	N	.	.	.	.	.	T	M	A	D	N	I	A	Y	R	E	Q	I	G
Query Conservation																															.	.	.	.	.																													.	.	.	.	.
Alig confidence																															.	.	.	.	.																													.	.	.	.	.
Template Conservation
Template Sequence		T	G	T	R	S	V	R	G	I	E	A	V	T	T	G	F	P	P	S	P	S	R	A	V	V	K	L	S	K	S	Q	T	G	F	F	T	I	A	D	L	L	K	E	Q	G	Y	H	T	Q	F	I	Y	G	G	E	A	N	F	D	N	X	K	T	F	F	F	G	N	G	F	D	Q	I	V	E	E	K	N	Y	T
Template Known Secondary structure		S		S	S																S	S			T	T	T		G	G	G	S	S	S	B										T	T								S	S		T	T	G	G	G								T	T							G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.			.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		A	E	P	R	N	R	G	K	P	V	D	D	M	L	L	V	D	E	M	Q	Q	S	L	G	R	N	.	.	P	D	G	K	H	L	I	I	L	H	T	K	G	S	H	F	N	Y	T	Q	R	Y	P	R	S	F	A	Q	W	K	P	E	C	I	G	V	D	S	G	C	T	K	A	Q	M	I	N	S	Y	D	N	S
Query Conservation																												.	.
Alig confidence																												.	.																				.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	G	F	V	G	S	W	G	V	S	D	E	D	L	Y	N	K	A	D	E	E	F	E	R	L	S	K	G	D	K	P	F	F	S	L	V	F	T	S	S	N	H	S	P	Y	E	.	.	Y	P	E	G	K	I	E	Q	Y	D	S	E	H	X	T	.	.	.	.	.	.	.	.	.	.	.	.	R	N	N	A
Template Known Secondary structure		S		S				T	T																				T	S	S	S										S	S	S	T	T			.	.			T	T	S	S			S	S	S	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.			.	.	.	.	.	460	.	.	.	.	.	.	.	.	.													470	.	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.					.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		V	T	Y	V	D	H	F	I	S	S	V	I	D	Q	V	R	D	.	.	.	.	K	K	A	I	V	F	Y	A	A	D	H	G	E	S	I	N	E	R	E	H	L	H	G	T	P	R	E	L	A	P	P	E	Q	F	R	V	P	M	M	V	W	M	S	D	K	Y	L	E	N	P	A	N	A	Q	A	F	A	Q	L
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																							.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	Y	S	D	Y	A	L	G	T	F	F	D	K	A	K	K	S	S	Y	W	D	D	T	I	F	I	V	I	A	D	H	D	A	R	V	F	G	A	N	L	V	P	.	.	.	.	.	.	.	.	V	K	H	F	H	I	P	A	L	I	I	G	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T	S	S	S	G	G	G								S			S				S		S	S			.	.	.	.	.	.	.	.	G	G	G	T								S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.									.	.	.	520	.	.	.	.	.	.	.	.	.	530
		514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	E	A	D	M	K	V	P	R	R	H	V	E	L	Y	D	T	I	M	G	C	L	G	Y	T	S	P	D	G	G	I	N	E	N	N	N	W	C	H	I	P	Q	A	K	E
Query Conservation
Alig confidence																															.	.
Template Conservation																															.	.
Template Sequence		I	Q	P	R	K	D	D	R	I	A	N	N	I	D	X	P	P	T	L	L	S	L	I	G	V	D	A	K	T	.	.	P	X	I	G	R	D	L	T	K	P	L	A	R	E	D
Template Known Secondary structure													G	G	G										T						.	.				S			T	T	S				G	G	G
Template Predicted Secondary structure																															.	.
Template SS confidence
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.			560	.	.	.	.	.	.	.	.	.	570	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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