Job Description P37661 Confidence 100.00% Date Thu Jan 5 11:56:34 GMT 2012 Rank 1 Aligned Residues 319 % Identity 13% Template c2w8dB_ PDB info PDB header:transferase Chain: B: PDB Molecule:processed glycerol phosphate lipoteichoic acid synthase 2; PDBTitle: distinct and essential morphogenic functions for wall- and2 lipo-teichoic acids in bacillus subtilis Resolution 2.35 Å

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		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.					280	.	.	.	.	.	.	.	.	.	290		.	.	.
Predicted Secondary structure																																																															.	.	.	.												.
Query SS confidence																																																															.	.	.	.												.
Query Sequence		A	R	V	D	E	S	S	D	N	N	S	L	L	N	P	A	K	K	F	T	Y	Q	A	P	Q	N	V	D	D	T	Y	V	V	F	I	I	G	E	T	T	R	W	D	H	M	G	I	F	G	Y	E	R	N	T	T	P	K	L	A	Q	E	.	.	.	.	K	N	L	A	A	F	R	G	Y	S	C	.	D	T	A
Query Conservation																																																															.	.	.	.												.
Alig confidence																																																															.	.	.	.												.
Template Conservation
Template Sequence		D	S	S	D	V	T	E	V	E	N	Y	X	K	A	N	Y	D	V	P	N	N	V	Y	F	G	K	A	E	G	K	N	V	I	Y	V	S	L	E	S	L	Q	S	F	I	I	D	Y	K	I	D	G	K	E	V	T	P	F	L	N	K	L	A	H	D	N	E	T	F	Y	F	D	N	F	F	H	Q	T	G	Q	G
Template Known Secondary structure			G	G	G											T						T	T	T	T	T	T	T	T	T									T	T			G	G	G	T	T				T	T			S	S									S	S	S	S				S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.					.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.																																																.	.	.	.
Query SS confidence																											.	.	.	.																																																.	.	.	.
Query Sequence		T	K	L	S	L	R	C	M	F	V	R	Q	G	G	A	E	D	N	P	Q	R	T	L	K	E	.	.	.	.	Q	N	I	F	A	V	L	K	Q	L	G	F	S	S	D	L	Y	A	M	Q	S	E	M	W	F	Y	S	N	T	M	A	D	N	I	A	Y	R	E	Q	I	G	A	E	P	R	N	R	.	.	.	.
Query Conservation																											.	.	.	.																																																.	.	.	.
Alig confidence																											.	.	.	.																																																.	.	.	.
Template Conservation
Template Sequence		K	S	D	A	E	F	X	X	E	N	S	L	Y	P	L	A	Q	G	S	V	F	V	N	K	A	Q	N	T	L	Q	S	V	P	A	I	L	K	S	K	N	Y	T	S	A	T	F	H	G	N	T	Q	T	F	W	N	R	N	E	X	Y	K	A	E	G	I	D	K	F	F	D	S	A	Y	Y	D	X	N	E	E	N
Template Known Secondary structure																	S	S	S							T	T	S									G	G	G	G	T								S	S		T	T	G	G	G									T							G	G	G	S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
				366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	G	K	P	V	D	D	M	L	L	V	D	E	M	Q	Q	S	L	G	R	N	P	D	G	K	H	L	I	I	L	H	T	K	G	S	H	F	N	Y	T	Q	R	Y	P	R	S	F	A	Q	W	K	P	E	C	I	G	V	D	S	G	C	T	K	A	Q	M	I	N	S	Y	D	N	S	V	T	Y	V	D	H
Query Conservation		.	.
Alig confidence		.	.																				.																				.	.									.	.	.	.	.	.	.
Template Conservation																							.																				.	.									.	.	.	.	.	.	.
Template Sequence		T	K	N	Y	G	X	K	D	K	P	F	F	K	E	S	X	P	L	L	E	S	.	L	P	Q	P	F	Y	T	K	F	I	T	L	S	N	H	F	P	F	G	.	.	X	D	E	G	D	T	D	F	.	.	.	.	.	.	.	P	A	G	D	F	G	D	S	V	V	D	N	Y	F	Q	S	A	H	Y	L	D	Q
Template Known Secondary structure		B		S	S	S	B															T	.	S		S	S									S	S		T	T			.	.			B	T	T	B			.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure																							.																				.	.									.	.	.	.	.	.	.
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.			.	.	.	420	.	.	.	.								.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
		444	.	.	.	.	.	450	.	.	.	.					.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.							.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure													.	.	.	.																					.	.	.	.	.	.
Query SS confidence													.	.	.	.																					.	.	.	.	.	.
Query Sequence		F	I	S	S	V	I	D	Q	V	R	D	.	.	.	.	K	K	A	I	V	F	Y	A	A	D	H	G	E	S	I	N	E	R	E	H	.	.	.	.	.	.	L	H	G	T	P	R	E	L	A	P	P	E	Q	F	R	V	P	M	M	V	W	M	S	D	K	Y	L	E	N	P	A	N	A	Q	A	F	A	Q	L
Query Conservation													.	.	.	.																					.	.	.	.	.	.
Alig confidence													.	.	.	.																					.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	E	Q	F	F	N	D	L	K	K	D	G	L	Y	D	K	S	I	I	V	X	Y	G	D	H	Y	G	I	S	E	N	H	N	K	A	X	A	K	V	L	G	K	D	E	I	T	D	Y	D	N	A	Q	L	Q	R	V	P	L	F	I	H	A	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	S		G	G	G									S		S	S		G	G	G								T	T	S	S										T	T	B								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
		514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	E	A	D	M	K	V	P	R	R	H	V	E	L	Y	D	T	I	M	G	C	L	G	Y	T	S	P	D	G	G	I	N	E	N	N	N	W	C	H	I	P	Q	A	K	E	A	A	A	N
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		V	K	G	E	K	V	H	K	Y	A	G	D	V	D	V	A	P	T	I	L	H	L	L	G	V	D	T	K	.	D	Y	L	X	S	G	S	D	I	L	S	K	E	H	R	E	V	I	P	F	R
Template Known Secondary structure		S							S				G	G	G									T	T				T	.	T	S							T	T	S	T	T								T
Template Predicted Secondary structure																														.
Template SS confidence
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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