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Job DescriptionP37661
Confidence99.92%DateThu Jan 5 11:56:34 GMT 2012
Rank16Aligned Residues256
% Identity17%Templatec2gsoB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:phosphodiesterase-nucleotide pyrophosphatase; PDBTitle: structure of xac nucleotide2 pyrophosphatase/phosphodiesterase in complex with vanadate
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   247..250.........260.........270......... 280.........290. ........300.........310.......
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Query Sequence  DTYVVFIIGETTRWDHMGIFGYERNTTPKLAQE. . KNLAAFRGYSCD. TATKLSLRCMFVRQGGAEDNPQRTLK. . . . . .
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Template Sequence  PHALLLISIDGLRADML. . . . . DRGITPNLSHLAREGVRARWMAPSYPSLTFPNHYTLVTGLRPDHHGIVHNSMRDPTLG
Template Known Secondary structure 

TT

GGGG.....SSSS
SS


SS
S


S

SSSTTT
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   45....50.........60. ........70.........80.........90.........100.........110.........
 
   318.320.........330.........340.........350.........360.........370.........380
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Query Sequence  . . . . . . . . . . . . . . . . . EQNIFAVLKQLGFSSDLYAMQSEMWFYSNTMADNIAYREQIGAEPRNRGKPVDDMLLVDEMQQ
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Template Sequence  GFWLSKSEAVGDARWWGGEPVWVGVENTGQHAATWSWPGSEAAIKGVRPSQWRHY. . . . . . . . . . QKGVRLDTRVDAVRG
Template Known Secondary structure 
TT
T
GGG

S

TT
SS
TTTTS
BTTB

SB



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TT

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   120.........130.........140.........150.........160.........170.... .....180.........
 
   381..... ...390.........400.........410.........420.........430.........440.........450.... .
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Query Sequence  SLGRNP. DGKHLIILHTKGSHFNYTQRYPRSFAQWKPECIGVDSGCTKAQMINSYDNSVTYVDHFISSVIDQVRD. . . . K
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Template Sequence  WLATDGAQRNRLVTLYFEHVDEAGHDHGPESR. . . . . . . . . . . . . . . . . . . . . QYADAVRAVDAAIGRLLAGMQRDGTRA
Template Known Secondary structure 

GGG


TTS.....................T
GG
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   190.........200.........210.........220. ........230.........240........
 
   456...460.........
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Query Sequence  KAIVFYAADHGESI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RTNIIVVSDHGMAEVAPGHAISVEDIAPPQIATAITDGQVIGFEPLPGQQAAAEASVLGAHDHYDCWRKAELPARWQYGS
Template Known Secondary structure  G
S



TT
S
TTT


BS
TT
STTGGGS
GGG

S
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   249250.........260.........270.........280.........290.........300.........310.........320........
 
   470.........480.........490.........500.........510.........520....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . NEREHLHGTPRELAPPEQFRVPMMVWMSDKYLENPANAQAFAQLKKEADMKVPRR
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Template Sequence  HPRIPSLVCQMHEGWDALFPDKLAKRAQRGTRGSHGYDPALPSMRAVFLAQGPD. . . . . . . . . . . . . . . LAQGKTLPGFD
Template Known Secondary structure  STTS
S
TT

S


S


S
TTSGGG
B
STT...............B
SS

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   329330.........340.........350.........360.........370.........380.. .......390...
 
   525....530.........540......... 550......
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Query Sequence  HVELYDTIMGCLGYTSPDGGINENN. . NWCHIPQ
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Template Sequence  NVDVYALMSRLLGIPAAP. . . NDGNPATLLPALR
Template Known Secondary structure  GGGTT



S...
SS
TTTTGGGB
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   394.....400.........410. ........420....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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