Job Description P37002 Confidence 3.99% Date Thu Jan 5 11:54:13 GMT 2012 Rank 16 Aligned Residues 120 % Identity 13% Template c3gd8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:aquaporin-4; PDBTitle: crystal structure of human aquaporin 4 at 1.8 and its mechanism of2 conductance Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																								.	.													.	.	.	.	.	.
Query SS confidence																								.	.													.	.	.	.	.	.
Query Sequence		M	L	Q	L	L	L	A	V	F	I	G	G	G	T	G	S	V	A	R	W	L	L	.	.	S	M	R	F	N	P	L	H	Q	A	I	P	.	.	.	.	.	.	L	G	T	L	T	A	N	L	I	G	A	F	I	I	G	I	G	F	A	W	F	S	R	M	T	N	I	D	P	V	W	K	V	L	I	T	T	G
Query Conservation																								.	.													.	.	.	.	.	.
Alig confidence																								.	.													.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	F	Y	I	A	A	Q	C	L	G	A	I	I	G	A	G	I	L	Y	L	V	T	P	P	S	V	V	G	G	L	G	V	T	M	V	H	G	N	L	T	A	G	H	G	L	L	V	E	L	I	I	T	F	Q	L	V	F	T	I	F	A	S	C	D	S	K	R	T	D	V	T	G	S	I	A	L	A	I	G
Template Known Secondary structure																								S						T	T	T	T						T	T	S																								T		T	T		S				S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90										.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.
Query Sequence		F	C	G	G	L	T	T	F	S	T	F	S	A	E	V	V	F	L	.	.	.	.	.	.	.	.	.	L	Q	E	G	R	F	G	W	A	L	L	N	V	F	V	N	L	L	G	S	F	A	M	T	A	L	A	F	W	L
Query Conservation																				.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	S	V	A	I	G	H	L	F	A	I	N	Y	T	G	A	S	M	N	P	A	R	S	F	G	P	A	V	I	M	G	N	W	E	N	H	W	I	Y	W	V	G	P	I	I	G	A	V	L	A	G	G	L	Y	E	Y	V
Template Known Secondary structure																																T			T	T	T	T																				T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions