Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADI4
Confidence99.56%DateThu Jan 5 11:21:04 GMT 2012
Rank29Aligned Residues139
% Identity18%Templatec2vsqA_
PDB info PDB header:ligaseChain: A: PDB Molecule:surfactin synthetase subunit 3; PDBTitle: structure of surfactin a synthetase c (srfa-c), a2 nonribosomal peptide synthetase termination module
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140. ........150.........160.........170.........180.........190.........
Predicted Secondary structure 


.



















...........
Query SS confidence 









.

























































. . . . . . . . . . .
Query Sequence  SPLEQMLKES. GRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALADFSRDEHLMSLKYVAGRSGR. . . . . . . . . . .
Query Conservation 
 
   

  .

 






 
  

  

 

   

 
 

 

 
    
 
  

  
      ...........
Alig confidence 









.














...........































...........
Template Conservation   


  
   
 
  
 
        ...........   


 
              
   

  
 
        

Template Sequence  EEIEKQLQEYPGVKDAVVVADRHESG. . . . . . . . . . . DASINAYLVNRTQLSAEDVKAHLKKQLPAYMVPQTFTFLDELP
Template Known Secondary structure  SSS



SSS...........


SSSS
S
GGGS
SS


Template Predicted Secondary structure 









...........


















Template SS confidence 















































































   874.....880.........890......... 900.........910.........920.........930.........940..
 
   200.........210.........220.........230.........240.........250........ .260..
Predicted Secondary structure  ................






















.



Query SS confidence  . . . . . . . . . . . . . . . .


























































.



Query Sequence  . . . . . . . . . . . . . . . . VVMTEELLPAPIPASKAALREVILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRKV. HGDI
Query Conservation  ................
  
     

   

  

   
  
     
  
  
  

 


    
   
   .
  
Alig confidence  ................





























.



























.



Template Conservation   
  




  
                   
  
  

  

   . 
   
 

 





 

 
   
    
  
Template Sequence  LTTNGKVNKRLLPKPDQDQLAEEWIGPRNEMEETIAQIWSEVLGRK. QIGIHDDFFALGGHALKAMTAASRIKKELGIDL
Template Known Secondary structure 

SS
SS

S





GGGG






SST
S.


TT

TTTTT

SSSTTS


Template Predicted Secondary structure 
















.













Template SS confidence 















































































   943......950.........960.........970.........980........ .990.........1000.........1010.........1020.
 
   263......270.........280..
Predicted Secondary structure 



Query SS confidence 



















Query Sequence  DFVMLAKNPTIDAWWKLLSR
Query Conservation      
   


  

  
  
Alig confidence 



















Template Conservation      

  


  

  
  
Template Sequence  PVKLLFEAPTIAGISAYLKN
Template Known Secondary structure 
SS
TTT

S
Template Predicted Secondary structure 





Template SS confidence 



















   1022.......1030.........1040.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions