 |
Job Description | P0ADI4 | Confidence | 99.64% | Date | Thu Jan 5 11:21:04 GMT 2012 |
Rank | 27 | Aligned Residues | 75 |
% Identity | 23% | Template | c2jgpA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:tyrocidine synthetase 3; |
PDBTitle: structure of the tycc5-6 pcp-c bidomain of the tyrocidine2 synthetase tycc
|
Resolution | 1.85 Å |
|
 |
  |   |
207 | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | |
. | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | A | P | I | P | A | S | K | A | A | L | R | E | V | I | L | P | L | L | D | E | S | D | E | P | F | D | D | D | N | L | I | D | Y | G | L | D | S | V | R | M | M | A | L | A | A | R | W | R | K | V | . |
H | G | D | I | D | F | V | M | L | A | K | N | P | T | I | D | A | W | W | K | L | L | S | R |
Query Conservation |   |
  |   |
|
|   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |
|
|
|   |   |   |   |
|   |   |   |
|   |   |   | . |
|   |   |
|   |   |   |   |
|   |   |   |
|
|
|   |   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |   |
|   |   |
|   |   |
|   |   |   |
|
|   |   |   | . |   |
|   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
Template Sequence |   |
Y | V | A | P | R | S | V | W | E | A | R | L | A | Q | V | W | E | Q | V | L | N | V | P | . |
Q | V | G | A | L | D | D | F | F | A | L | G | G | H | S | L | R | A | M | R | V | L | S | S | M | H | N | E | Y | Q | V | D | I | P | L | R | I | L | F | E | K | P | T | I | Q | E | L | A | A | F | I | E | E |
Template Known Secondary structure |   |
|
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | . |
|
|
| T | T |
| B | T | T | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| B |
|
|
|  |  |  |  |  |  | S |
| B |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|