Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADS6
Confidence9.07%DateThu Jan 5 11:21:44 GMT 2012
Rank37Aligned Residues75
% Identity12%Templatec1jd7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-amylase; PDBTitle: crystal structure analysis of the mutant k300r of2 pseudoalteromonas haloplanctis alpha-amylase
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.........80.........90.........100.........110....... ..120.........130.........140...
Predicted Secondary structure 









..







Query SS confidence 



















































. .

























Query Sequence  DERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDGKSILKGYRAVRTVEV. . TLRQLDKLNSLLDGALKAGLNEIRSV
Query Conservation        
   

  

    
 
   

 
 
          

     
 
..   
      

      
   
   
Alig confidence 















.......
























.


..

























Template Conservation    
  

 


  


....... 



 

 
       
 

   
.
 
    

  


 

  

  

 



 
Template Sequence  QDVAQECEQYLGPKGY. . . . . . . AAVQVSPPNEHITGSQWWTRYQPVS. YELQSRGGNRAQFIDMVNRCSAAGVDIYVDT
Template Known Secondary structure  TT
.......



S
BB
SSSGGGGGSBS
.SSS
BTTB
TT
Template Predicted Secondary structure 


.......




















.









Template SS confidence 















































































   14.....20......... 30.........40.........50.... .....60.........70.........80.....
 
   144....
Predicted Secondary structure 
Query SS confidence 




Query Sequence  SLGVA
Query Conservation      
Alig confidence 




Template Conservation 
 

 
Template Sequence  LINHM
Template Known Secondary structure 
S
Template Predicted Secondary structure 


Template SS confidence 




   86...90
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions