 |
Job Description | P0ADS6 | Confidence | 7.33% | Date | Thu Jan 5 11:21:44 GMT 2012 |
Rank | 43 | Aligned Residues | 16 |
% Identity | 31% | Template | c1ceuA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:protein (hiv-1 regulatory protein n-terminal |
PDBTitle: nmr structure of the (1-51) n-terminal domain of the hiv-12 regulatory protein
|
Resolution | UNK |
|
  |   |
231 | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | L | E | P | V | D | Q | Q | P | A | K | T | P | A | A | Q |
Query Conservation |   |
  |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|   |
|
|   |
|
|
|   |   |
|
Template Sequence |   |
E | Q | A | P | E | D | Q | G | P | Q | R | E | P | Y | N | D |
Template Known Secondary structure |   |
| S |
|
|
| T | T | T | T |
|
|
| T | T | S |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|