Return to main results Retrieve Phyre Job Id

Job DescriptionP06846
Confidence99.95%DateThu Jan 5 10:59:26 GMT 2012
Rank46Aligned Residues258
% Identity19%Templated1guda_
SCOP infoPeriplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like
Resolution1.7

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VNQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTNCYEHSGLPDIK. . . . . . . . . . . NVTGILIVGKPTP. .
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Template Sequence  AAEYAVVL. . . . . . . KTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNL
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Query Sequence  . ALRAAASALTDNICFIDFH. . . . . . . . EPGSGYDAVDIDLARISKEIIDFYINQ. . . GVNRIGFIGGEDEPGKADIREV
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Template Sequence  VMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRN
Template Known Secondary structure  TT
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Query Sequence  AFAEYGRLKQVVREEDIWRGGFSSSSGYELAKQMLAREDYPKALFVASDSIAIGVLRAIHERGLNIPQDISLISVNDIPT
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Template Sequence  GATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG. . KTGKVLVVGTDGIPE
Template Known Secondary structure  T
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Query Sequence  ARFTFPP. . . LSTVRIHSEMMGSQGVNLVYEKARDGRALPLLVFVPSKLKLRGTT
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Template Sequence  ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILV
Template Known Secondary structure  TSS


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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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