Job Description P06846 Confidence 90.40% Date Thu Jan 5 10:59:26 GMT 2012 Rank 308 Aligned Residues 35 % Identity 20% Template c3hugA_ PDB info PDB header:transcription/membrane protein Chain: A: PDB Molecule:rna polymerase sigma factor; PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	K	D	I	A	I	E	A	G	V	S	L	A	T	V	S	R	V	L	N	D	D	P	T	L	N	V	K	E	E	T	K	H	R	I	L	E	I	A	E	K	L	E
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.
Template Sequence		S	T	A	Q	I	A	T	D	L	G	I	A	E	G	T	V	K	S	R	L	H	Y	A	.	.	.	.	.	.	.	.	.	V	R	A	L	R	L	T	L	Q	E	L	G
Template Known Secondary structure											T	S													.	.	.	.	.	.	.	.	.												T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.										.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions