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Job DescriptionP06846
Confidence100.00%DateThu Jan 5 10:59:26 GMT 2012
Rank13Aligned Residues263
% Identity20%Templatec3dbiA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:sugar-binding transcriptional regulator, laci family; PDBTitle: crystal structure of sugar-binding transcriptional regulator (laci2 family) from escherichia coli complexed with phosphate
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   5960.........70.........80.........90.........100.........110...... ...120.......
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Query Sequence  AVNQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTNCYEHSGLPDIKNVT. . . . . . . . . . . GILIVGKPTPA
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Template Sequence  STQTLGLVVT. . . . . NTLYHGIYFSELLFHAARXAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIXIYPRFLSVDE
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S
.....TTTTSTTTT

TTSTT
S

SSS
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   60......... 70.........80.........90.........100.........110.........120.........130....
 
   128.130.........140.........150.........160.........170.........180.........190.........200.......
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Query Sequence  LRAAASALTDNICFIDFHEPGSGYDAVDIDLARISKEIIDFYINQGVNRIGFIGGEDEPGKADIREVAFAEYGRLKQVVR
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Template Sequence  IDDIIDAHSQPIXVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQEIAFLTGSXDSPTSIERLAGYKDALAQHGIAL
Template Known Secondary structure 
SS
SS

SSSGGG
B
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   135....140.........150.........160.........170.........180.........190.........200.........210....
 
   208.210 .........220.........230.........240.........250.........260.........270.........280......
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Query Sequence  EED. IWRGGFSSSSGYELAKQMLAREDYPKALFVASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTARFTFPPLSTVR
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Template Sequence  NEKLIANGKWTPASGAEGVEXLLERGAKFSALVASNDDXAIGAXKALHERGVAVPEQVSVIGFDDIAIAPYTVPALSSVK
Template Known Secondary structure 
GGG


SSTT


SSSTT

TTTT
S

TTGGGSSS

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   215....220.........230.........240.........250.........260.........270.........280.........290....
 
   287..290.........300.........310.........320.......
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Query Sequence  IHSEMMGSQGVNLVYEKARDGRALPLLVFVPSKLKLRGTTR
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Template Sequence  IPVTEXIQEIIGRLIFXLDGGDFSPPKT. FSGKLIRRDSLI
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.B



TT

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   295....300.........310.........320.. .......330....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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