Job Description P06846 Confidence 100.00% Date Thu Jan 5 10:59:26 GMT 2012 Rank 5 Aligned Residues 258 % Identity 23% Template c3c3kA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:alanine racemase; PDBTitle: crystal structure of an uncharacterized protein from actinobacillus2 succinogenes Resolution 1.99 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.										.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.
Query Sequence		A	V	N	Q	H	H	I	L	A	I	Y	S	Y	Q	Q	E	L	E	I	N	D	P	Y	Y	L	A	I	R	H	G	I	E	T	Q	C	E	K	L	G	I	E	L	T	N	C	Y	E	H	S	G	L	P	D	I	.	.	.	.	.	.	.	.	.	K	N	V	T	G	I	L	I	V	G	K	P	T	P	A	L	R
Query Conservation																																																								.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.
Template Sequence		K	T	G	M	L	L	V	M	V	.	.	.	.	.	.	.	S	N	I	A	N	P	F	C	A	A	V	V	K	G	I	E	K	T	A	E	K	N	G	Y	R	I	L	L	C	N	T	E	S	D	L	A	R	S	R	S	C	L	T	L	L	S	G	K	M	V	D	G	V	I	T	M	D	A	L	S	E	L	P	E
Template Known Secondary structure											.	.	.	.	.	.	.	S		T	T	S																	T	T									T	T									T					T	T			S								G	G	G
Template Predicted Secondary structure											.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.								.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	S	A	L	T	D	N	I	C	F	I	D	F	H	E	P	G	S	G	Y	D	A	V	D	I	D	L	A	R	I	S	K	E	I	I	D	F	Y	I	N	Q	G	V	N	R	I	G	F	I	G	G	E	D	E	P	G	K	A	D	I	R	E	V	A	F	A	E	Y	G	R	L	K	Q	V	V	R	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	N	I	I	G	A	F	P	W	V	Q	C	A	E	Y	D	P	L	S	T	V	S	S	V	S	I	D	D	V	A	A	S	E	Y	V	V	D	Q	L	V	K	S	G	K	K	R	I	A	L	I	N	H	D	L	A	Y	Q	Y	A	Q	H	R	E	S	G	Y	L	N	R	L	K	F	H	G	L	D	Y	S	R
Template Known Secondary structure							T	T	S	S					S	S			T	T	S	S	S																					T	T											T	T	S																		T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	W	R	G	G	F	S	S	S	S	G	Y	E	L	A	K	Q	M	L	A	R	E	D	Y	P	K	A	L	F	V	A	S	D	S	I	A	I	G	V	L	R	A	I	H	E	R	G	L	N	I	P	Q	D	I	S	L	I	S	V	N	D	I	P	T	A	R	F	T	F	P	P	L	S	T	V	R	I	H	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	Y	A	E	N	L	D	Y	M	A	G	K	L	A	T	F	S	L	L	K	S	A	V	K	P	D	A	I	F	A	I	S	D	V	L	A	A	G	A	I	Q	A	L	T	E	S	G	L	S	I	P	Q	D	V	A	V	V	G	F	D	G	V	D	I	S	Q	I	T	V	P	A	L	T	T	V	Q	Q	P	S
Template Known Secondary structure						S	S	S	S													S	S	S	S			S					S	S														T	T			T	T	T	T						S	B			G	G	G	G	T	S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	M	G	S	Q	G	V	N	L	V	Y	E	K	A	R	D	G	R	A	L	P	L	L	V	F	V	P	S	K	L	K	L	R	G	T	T	R
Query Conservation
Alig confidence																					.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		E	Q	I	G	M	K	A	V	S	L	L	L	E	Q	I	H	S	D	V	.	.	.	.	H	H	L	L	P	W	K	F	V	R	R	Q	S	S	E
Template Known Secondary structure																	T				.	.	.	.												T	T	T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.					.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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