Job Description P06846 Confidence 90.41% Date Thu Jan 5 10:59:26 GMT 2012 Rank 307 Aligned Residues 83 % Identity 16% Template c2xroE_ PDB info PDB header:dna-binding protein/dna Chain: E: PDB Molecule:hth-type transcriptional regulator ttgv; PDBTitle: crystal structure of ttgv in complex with its dna operator Resolution 3.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	L	K	D	I	A	I	E	A	G	V	S	L	A	T	V	S	R	V	L	N	D	D	P	T	L	N	V	K	E	E	T	K	H	R	I	L	E	I	A	E	K	L	E	Y	K	T	S	S	A	R	K	L	Q	T	G	A	V	N	Q	H	H	I	L	A	I	Y	S	Y	Q	Q	E	L	E	I	N	D	P	Y
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Sequence		L	S	L	A	A	I	A	Q	L	V	G	L	P	R	S	T	V	Q	R	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	L	E	E	E	F	L	V	.	.	.	.	.	.	.	E	A	L	G	P	A	G	G	F	R	L	G	P	A	L	G	Q	L	I	N	Q	A	Q	T	D	I
Template Known Secondary structure		B									S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T	S		.	.	.	.	.	.	.				S	S	S	S						T								T	T	T	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																		.	.	.	.	.	60	.	.	.								.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	A	I	R	H	G	I	E	T	Q	C	E	K	L	G	I	E	L	T	N	C	Y	E	H	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	L	V	K	P	Y	L	R	S	L	A	E	E	L	D	E	S	V	S	L	A	S	L	A	G	D
Template Known Secondary structure																S		S									T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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