Return to main results Retrieve Phyre Job Id

Job DescriptionP21169
Confidence99.82%DateThu Jan 5 11:37:54 GMT 2012
Rank76Aligned Residues310
% Identity13%Templated2fnua1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GDLLIHEGSAKDAQKFAAKVFHADKTYFVLNGTSAANKVVTNALLTRGD. . LVLFDRNNHKSNHHGALIQAGATPVYLEA
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Template Sequence  SKQLTQGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATAN. MLLESGYTPVFAGI
Template Known Secondary structure  SS

SSST
SS
SS


TTS

SSS
T.TT


B
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   25....30.........40.........50.........60.........70.........80......... 90.........100...
 
   237..240.........250.........260.........270.........280.........290.........300.........310......
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Query Sequence  SRNPFGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPYRLAIIQLGTYDGTVYNARQVIDTVGHLCDYILFDSAWVGYE
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Template Conservation      ......................      
                 
       
  

      

 
 
   
 
Template Sequence  KNDG. . . . . . . . . . . . . . . . . . . . . . NIDELALEKLINERTKAIVSVDYAGKSVEVESVQKLCKKHSLSFLSDSSHALGS
Template Known Secondary structure 
TTS......................SB
GGGSGGG

TT
GGG



T

TT
TT
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   317..320.........330.........340.........350.........360.........370.........380.........390...
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Query Sequence  QFIPMMADSSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYPL. . .
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Template Sequence  EYQ. . . . . NKKVGGFALAS. . . . VFSFHAIKPITTAEGGAVVTNDSE. . . . . . . . . . LHEKMKLFRSHGMLKKDFFEGEV
Template Known Secondary structure  T.....TTTSSSS....

TTSSS

SS
S
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   162.. .....170..... ....180.........190......... 200.........210.........220..
 
   394.....400.........410.........420.........430.........440.........450.........460.....
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Query Sequence  . . . . . . . . FAALDVNAKIHEGESGRRLWAECVEIGIEARKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFE
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Template Sequence  KSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKS. . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SS


B



TTTT
SSSGGG
SS

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   223......230.........240.........250.........260.........270.........280.
 
   466...470.........480.........490.........500.........510.........520...
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Query Sequence  PGAKWHGFEGYAADQYFVDPCKLLLTTPGIDAETGEYSDFGVPATILAHYLRENGIVP. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . SNHLYPILMH. . . . . . . . . QKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPL
Template Known Secondary structure  ..................

S

.........GGGGGGTT
B




GGGS




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   282.......290. ........300.........310.........320.........330....
 
   524.....530.........540.........550........
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Query Sequence  . . . EKCDLNSILFLLTPAESHEKLAQLVAMLAQFEQHI
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Template Sequence  KSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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