Job Description P21169 Confidence 99.44% Date Thu Jan 5 11:37:54 GMT 2012 Rank 208 Aligned Residues 305 % Identity 11% Template d2cfba1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.85

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		D	V	K	L	G	D	L	L	I	H	E	G	S	A	K	D	A	Q	K	F	A	A	K	V	F	H	A	D	K	T	Y	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	L	.	.	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	I	Q	A	G	A	T	P	V
Query Conservation																																																			.	.
Alig confidence																																																			.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	K	G	T	S	F	G	A	P	C	L	L	E	N	I	L	A	E	M	V	I	A	A	V	P	S	V	E	M	V	R	F	V	N	S	G	T	E	A	C	M	A	V	L	R	L	M	R	A	Y	T	Q	R	E	K	V	I	K	F	E	G	C	Y	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T		S			S	S																	S	S		S						S	S																	T									T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.							.	.	.
Query SS confidence																																																							.	.	.							.	.	.
Query Sequence		Y	L	E	A	S	R	N	P	F	G	F	I	G	G	I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	T	Y	.	.	.	D	G	T	V	Y	N	.	.	.	A	R	Q	V	I	D	T	V	G	H	L	C	D	Y	I
Query Conservation																																																							.	.	.							.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.									.	.	.							.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	G	H	A	A	T	L	T	A	P	Y	N	D	L	E	A	V	S	R	L	F	E	Q	Y	P	N	D	I	A	.	.	.	.	.	.	.	.	G	V	I	L	E	P	V	V	G	N	A	G	F	I	P	P	D	A	G	F	L	E	G	L	R	E	L	T	K	Q	Y	G	A	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.										T	T												S	T	T	T			.	.	.	.	.	.	.	.						S	S	B		S	S	S		B				T	T												T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template SS confidence
											130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.									.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	S	S	P	L	L	L	E	L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C	P	H	K	R	L	N	N	A	F	M	L	H	A	S
Query Conservation
Alig confidence										.				.	.	.	.	.													.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.				.	.	.	.	.													.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	D	E	V	M	T	G	.	F	R	I	.	.	.	.	.	A	Y	G	G	A	Q	E	K	F	G	V	T	.	.	.	.	P	D	L	T	T	L	G	K	V	I	G	G	G	L	P	V	G	A	Y	G	G	.	.	.	.	.	.	.	.	.	.	.	.	R	A	E	I	M	K	M	V	A	P	A	G	P	T
Template Known Secondary structure						T	T	T	T	.	T	T	T	.	.	.	.	.		T	T							T			.	.	.	.		S						G	G	G	G	T	T	S								.	.	.	.	.	.	.	.	.	.	.	.						T	T	S		T	T
Template Predicted Secondary structure										.				.	.	.	.	.													.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.		.	230	.						.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.													.	.	.	.	.	270	.	.	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	P	F	Y	P	L	F	A	A	L	D	V	N	A	K	I	H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T	S	V	L	A	S	D	R	R	F	F	S	F	E	P
Query Conservation
Alig confidence																					.	.	.
Template Conservation																					.	.	.
Template Sequence		L	S	G	N	P	L	A	M	T	A	G	I	K	T	L	E	I	L	S	.	.	.	R	P	G	S	Y	E	H	L	D	R	I	T	G	K	L	V	Q	G	L	L	D	A	A	R	E	F	G	H	E	V	C	G	G	H	I	S	G	M	F	G	L	F	F	T	A	G	P	V	T	N	Y	E	Q	A	K	Q	S	D
Template Known Secondary structure																				T	.	.	.	S	T	T																						T	T	T									T	T						S	S	S				S	S					T	T	S
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	K	W	H	G	F	E	G	Y	A	A	D	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	R	E	N	G	I	V	P	E	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E	S	H	E	K	L	A	Q
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	A	A	F	H	R	G	M	L	E	Q	G	I	Y	L	A	P	S	Q	.	.	F	E	A	G	F	T	S	L	A	H	T	E	A	D	I	E	R
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T					S	S	T	.	.	T	S						T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		361	.																																								.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.			.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		547	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	A	M	L	A	Q	F	E	Q	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	A	A	A	R	T	V	L	S	Q
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions