Job Description P21169 Confidence 99.50% Date Thu Jan 5 11:37:54 GMT 2012 Rank 203 Aligned Residues 321 % Identity 13% Template d1zoda1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.80

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																		.	.																				.	.																																		.	.	.	.	.	.	.	.
Query SS confidence																		.	.																				.	.																																		.	.	.	.	.	.	.	.
Query Sequence		H	E	G	S	A	K	D	A	Q	K	F	A	A	K	V	F	.	.	H	A	D	K	T	Y	F	V	L	N	G	T	S	A	A	N	K	V	V	.	.	T	N	A	L	L	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	I	Q	A	G	A	T	P	.	.	.	.	.	.	.	.
Query Conservation																		.	.																				.	.																																		.	.	.	.	.	.	.	.
Alig confidence																		.	.																				.	.																								.										.	.	.	.	.	.	.	.
Template Conservation																																																																.
Template Sequence		L	S	R	P	V	V	D	L	A	T	R	L	A	N	I	T	P	P	G	L	D	R	A	L	L	L	S	T	G	A	E	S	N	E	A	A	I	R	M	A	K	L	V	T	G	K	Y	E	I	V	G	F	A	Q	S	W	H	G	M	T	G	A	.	A	A	S	A	T	Y	S	A	G	R	K	G	V	G	P	A	A
Template Known Secondary structure																	S		T	T								S																		T								T	T					S	S			.				T			S	S			S	S	S
Template Predicted Secondary structure																																																																.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
				232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.					.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.							.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																															.	.	.	.																															.	.	.	.	.	.
Query SS confidence		.	.																															.	.	.	.																															.	.	.	.	.	.
Query Sequence		.	.	V	Y	L	E	A	S	R	N	P	F	G	F	I	G	G	I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	.	.	.	.	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	T	Y	D	G	T	V	Y	N	.	.	.	.	.	.	A	R	Q	V	I	D	T	V
Query Conservation		.	.																															.	.	.	.																															.	.	.	.	.	.
Alig confidence		.	.																															.	.	.	.									.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.
Template Sequence		V	G	S	F	A	I	P	A	P	F	T	Y	R	P	R	F	E	R	N	G	A	Y	D	Y	L	A	E	L	D	Y	A	F	D	L	I	D	R	Q	S	S	G	N	L	A	.	.	.	.	.	.	.	.	A	F	I	A	E	P	I	L	S	S	G	G	I	I	E	L	P	D	G	Y	M	A	A	L	K	R	K	C
Template Known Secondary structure		T	T									T	T	S						T	T																					S				.	.	.	.	.	.	.	.						S			T	T	T	T						T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.									.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	S	S	P	L	L	L	E	L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C	P	H	K	R	L	N	N
Query Conservation
Alig confidence																						.	.	.														.	.	.	.						.	.																		.	.	.	.	.	.	.	.
Template Conservation																						.	.	.														.	.	.	.						.	.																		.	.	.	.	.	.	.	.
Template Sequence		E	A	R	G	M	L	L	I	L	D	E	A	Q	T	G	V	G	R	T	G	.	.	.	T	M	F	A	C	Q	R	D	G	V	T	P	D	.	.	.	.	I	L	T	L	S	.	.	K	T	L	G	A	G	L	P	L	A	A	I	V	T	S	A	A	.	.	.	.	.	.	.	.	I	E	E	R	A	H	E	L
Template Known Secondary structure					T								T	T	T	T	T	T	T	T	S	.	.	.	S	S	S	T					T				S	.	.	.	.						.	.					T	T	S	S										.	.	.	.	.	.	.	.								T
Template Predicted Secondary structure																						.	.	.														.	.	.	.						.	.																		.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.									.	290	.	.	.	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	M	L	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	D	V	N	A	K	I	H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T	S	V	L	A	S	D	R
Query Conservation
Alig confidence																												.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	L	F	Y	T	T	H	V	S	D	P	L	P	A	A	V	G	L	R	V	L	D	V	V	Q	.	.	.	R	D	G	L	V	A	R	A	N	V	M	G	D	R	L	R	R	G	L	L	D	L	M	E	R	F	D	C	I	G	D	V	R	G	R	G	L	L	L	G	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T						T	T	T	T																	.	.	.		T	T																								T	T								T	T				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.				.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.					.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.
Query SS confidence																																																																				.	.	.	.
Query Sequence		R	F	F	S	F	E	P	G	A	K	W	H	G	F	E	G	Y	A	A	D	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	R	E	N	G	I	V	P	E	K	.	.	.	.	C	D	L	N	S	I	L	F	L	L
Query Conservation																																																																				.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	I	V	K	D	R	R	T	K	.	.	.	.	.	.	.	.	.	.	E	P	A	D	G	L	G	A	K	I	T	R	E	C	M	N	L	G	L	S	M	N	I	V	Q	L	P	G	M	G	G	V	F	R	I	A	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T	T	.	.	.	.	.	.	.	.	.	.				T	T												T	T									T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template SS confidence
																									363	.	.	.	.	.	.	370	.	.											.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	A	E	S	H	E	K	L	A	Q	L	V	A	M	L	A	Q	F	E	Q	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	T	V	S	E	D	E	I	D	L	G	L	S	L	L	G	Q	A	I	E	R
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions