Job Description P21169 Confidence 99.78% Date Thu Jan 5 11:37:54 GMT 2012 Rank 86 Aligned Residues 303 % Identity 12% Template d1qz9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.85

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		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.								.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																			.	.	.	.	.	.	.
Query SS confidence																				.																			.	.	.	.	.	.	.
Query Sequence		S	A	K	D	A	Q	K	F	A	A	K	V	F	H	A	D	K	T	.	Y	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	.	.	.	.	.	.	.	L	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	I	Q	A	G	A	T	P	V	Y	L	E	A	S	R
Query Conservation																				.																			.	.	.	.	.	.	.
Alig confidence																				.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	E	R	L	G	N	R	L	A	T	L	I	G	A	R	D	G	E	V	V	V	T	D	T	T	S	I	N	L	F	K	V	L	S	A	A	L	R	V	Q	A	T	R	S	P	E	R	R	V	I	V	T	E	T	S	N	F	P	T	D	L	Y	I	A	E	G	L	A	D	M	L	Q	Q	G	Y	T	L	R	L
Template Known Secondary structure												T	T	T	T			T	T	S					S																					S	T	T								T	T	S																	S	S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		N	P	F	G	F	I	G	G	I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	.	T	Y	D	G	T	V	Y	N	A	R	Q	V	I	D	T	V	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q
Query Conservation																																															.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.							.																																	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																																								.	.
Template Sequence		V	D	.	.	.	.	.	.	.	.	.	.	.	.	S	P	E	E	L	P	Q	A	I	D	Q	D	T	A	V	.	.	.	.	.	.	.	.	.	.	V	M	L	T	H	V	N	Y	K	T	G	Y	M	H	D	M	Q	A	L	T	A	L	S	H	E	C	G	A	L	A	I	W	D	L	A	H	S	A	G	.	.
Template Known Secondary structure			S	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G						S	T	T				.	.	.	.	.	.	.	.	.	.					S	B		T	T	T		B	B														T								T	T	T	T	T	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																																								.	.
Template SS confidence
		152	.													.	.	.	.	.	.	160	.	.	.	.	.	.	.	.											.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.														.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																		.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	P	M	M	A	D	S	S	P	L	L	L	E	L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	.	A	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	K	R	L	N	N	A	F	M	L
Query Conservation																																		.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.													.	.	.	.											.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.													.	.	.	.
Template Sequence		.	.	.	.	.	.	A	V	P	V	D	L	H	Q	A	G	A	D	.	.	.	.	Y	A	I	G	C	T	Y	K	Y	L	N	G	G	P	G	S	Q	A	F	V	W	V	S	P	Q	L	C	D	L	V	P	Q	P	L	S	G	W	F	G	H	S	R	Q	F	A	M	E	P	R	Y	E	P	S	N	G	I	A	R
Template Known Secondary structure		.	.	.	.	.	.	T	S								T		S	.	.	.	.						S	S	S	T	T				T	T									T	T	T	T	T	T	S			S				G	G	G	B		T	T	S				S	S			B		S	S	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.													.	.	.	.
Template SS confidence
								208	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	S	T	S	P	F	Y	P	L	F	A	A	L	D	V	N	A	K	I	H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T	S	V	L	A	S	D	R	R	F	F	S
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	C	G	T	Q	P	I	T	S	L	A	M	V	E	C	G	L	D	V	F	A	Q	T	D	M	A	S	L	R	R	K	S	L	A	L	T	D	L	F	I	E	L	V	E	Q	R	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G			S																		T	T	S																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.		.	.	.	.	540	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		F	E	P	G	A	K	W	H	G	F	E	G	Y	A	A	D	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	R	E	N	G	I	V	P	E	K	C	D	L	N	S	I	L	F	L	L	.	T	P	A	E	S	H	E
Query Conservation																																																																										.
Alig confidence		.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation		.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	A	A	H	E	L	T	L	V	T	P	R	E	H	A	K	R	G	S	H	V	S	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	E	G	Y	A	V	I	Q	A	L	I	D	R	G	V	I	G	D	Y	R	E	P	R	I	M	R	F	G	F	T	P	L	Y	T	T	F	T
Template Known Secondary structure		.	.	.	.	.	T	T	S						S		S	S	G	G	G	B		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T										T	T	T							T	T	T								T	T	T
Template Predicted Secondary structure		.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.															.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		543	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	A	Q	L	V	A	M	L	A	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	W	D	A	V	Q	I	L	G	E	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions