Job Description P21169 Confidence 99.63% Date Thu Jan 5 11:37:54 GMT 2012 Rank 173 Aligned Residues 300 % Identity 13% Template d1pffa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.50

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	F	A	A	K	V	F	H	A	D	K	T	Y	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	L	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	I	Q	A	G	A	T	P	V	Y	L	E	A	S	R	N	P	F	G	F	I	G	G	I	D	A	H	C
Query Conservation
Alig confidence															.																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	K	I	A	K	L	E	H	A	E	A	C	.	A	A	T	A	S	G	M	G	A	I	A	A	S	V	W	T	F	L	K	A	G	D	H	L	I	S	D	D	C	L	Y	G	C	T	H	A	L	F	E	H	Q	L	R	K	F	G	V	E	V	D	F	.	.	.	.	.	.	.	.	.	.	.	.	I	D	M
Template Known Secondary structure										T		S			.				S	S															T	T							S												T					T	T						.	.	.	.	.	.	.	.	.	.	.	.			T
Template Predicted Secondary structure															.																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.													.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	T	Y	D	G	T	V	Y	N	A	R	Q	V	I	D	T	V	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A	D	S	S	P	L	L	L	E
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template Sequence		A	V	P	G	N	I	E	K	H	L	K	P	N	T	R	I	V	Y	.	.	.	.	.	.	.	.	F	E	T	P	A	N	P	T	L	K	V	I	D	I	E	D	A	V	K	Q	A	R	K	Q	K	D	I	L	V	I	V	D	N	T	F	A	S	P	I	L	T	N	P	.	.	.	.	.	.	.	.	.	L	D
Template Known Secondary structure		T	S	T	T					T			T	T						.	.	.	.	.	.	.	.			S	S		T	T	T														T	T	S	S	S								T	T	T							G	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.									.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.										.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C	P	H	K	R	L	N	N	A	F	M	L	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	D	V	N	A	K	I	H	E	G	E	S	G	R	R
Query Conservation
Alig confidence						.	.	.	.																											.	.	.	.	.	.																																					.	.	.	.
Template Conservation						.	.	.	.																											.	.	.	.	.	.																																					.	.	.	.
Template Sequence		L	G	V	D	.	.	.	.	I	V	V	H	S	A	T	K	Y	I	N	G	H	T	D	V	V	A	G	L	V	C	S	R	A	D	.	.	.	.	.	.	I	I	A	K	V	K	S	Q	G	I	K	D	I	T	G	A	I	I	S	P	H	D	A	W	L	I	T	R	G	T	L	T	L	D	M	R	.	.	.	.
Template Known Secondary structure		G	T		S	.	.	.	.						T	T	T	T	T	S	S	S	S	S												.	.	.	.	.	.								T																													.	.	.	.
Template Predicted Secondary structure						.	.	.	.																											.	.	.	.	.	.																																					.	.	.	.
Template SS confidence
		198	.	200	.					.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.							.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T	S	V	L	A	S	D	R	R	F	F	S	F	E	P	G	A	K	W	H	G	F	E	G	Y	A	A	D	Q	Y	F	V	D	P	C	K	L	L	L	T
Query Conservation
Alig confidence		.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	V	K	R	A	A	E	N	A	Q	K	V	A	E	F	L	H	E	H	K	A	V	K	K	V	Y	Y	P	G	L	P	D	H	P	G	H	E	I	A	K	K	Q	M	K	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	S	M	I	A	F	D
Template Known Secondary structure		.																			T	T							T	T	S	T	T	S	T	T									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure		.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.																												.	.	310	.	.	.	.	.
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.																												.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	R	E	N	G	I	V	P	E	K	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	S	I	L	F	L	L	T	P	A	E	S	H	E	K	L
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	G	.	.	.	.	.	.	.	.	.	.	.	L	E	K	A	K	K	V	L	D	N	C	H	V	V	S	L	A	V	S	L	G	G	P	E	S	L	I	Q	H	P	A	S	M	T	H	A	G	V	P	K	E	E	R	E	A	A	G	L	T	D	N	L	I	R	L	S	V	G	C	E	N	V	Q	D	I	I
Template Known Secondary structure			S	S	.	.	.	.	.	.	.	.	.	.	.										T		S	S	S				S	S			S	S	S										T	S	T	T	S								T	T			T	T								S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		316	.	.												.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		545	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	V	A	M	L	A	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	D	L	K	Q	A	L	D	L	V
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions