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Job DescriptionP21169
Confidence99.74%DateThu Jan 5 11:37:54 GMT 2012
Rank111Aligned Residues383
% Identity11%Templated1iaya_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.........140.........150.........160.........170......
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Query Sequence  NLLPPFYDTLTQYVEMGNSTFACPGHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVKLGDLLIHEGSAKDAQKFAA.
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Template Sequence  TNESPYFDGWKAYDSDPFHPLKNPNGVIQMGLAENQLCLDLIEDWIKRNPKGSICSSFKAIANFQDYHGLPEFRKAIAKF
Template Known Secondary structure  GG


TTSB

SSSSTTSB
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SS
TTSSTT




TT

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   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   177..180..... ....190.........200.........210.........220........ .230.........240........
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Query Sequence  . . KVFHADKTY. . . . . FVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAG. ATPVYLEASRNPFGFIGGID
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Template Sequence  MEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNR. DLRWRTGVQLIPIHCESSNNFKI. . . .
Template Known Secondary structure  TTT
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TTS


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TT.TTTTT




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   106...110.........120.........130.........140.........150....... ..160.........170.........180
 
   249250.........260.........270.........280......... 290.........300.........310..... ....320.
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Query Sequence  AHCFNEEYLRQQIRDVAPEKADLPRPYRLAIIQLGTYDGTV. . . . YNARQVIDTVGHLCDYILFDSAWVGY. . . EQFIPM
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Template Sequence  . . . . TSKAVKEAYENAQKSNI. . . . KVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVS
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TT
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TTT

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   181........190....... ..200.........210.........220.........230.........240.........250..
 
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Query Sequence  MADSSPLLLELNENDPGIFVTQSVHKQQ. . AGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDV
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Template Sequence  IAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYS. . . . . . . . . . . . . FNDDVVNCARKMSSFGLVSTQTQYF. L
Template Known Secondary structure  TSGGGTTS
TTSSTTTSS
GGG
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TTS


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   253......260.........270.........280.........290.. .......300.........310....... .
 
   400.........410.........420.........430.........440.........450.........460.........470.........
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Query Sequence  NAKIHEGESGRRLWAECVEIGIEARKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFEPGAKWHGFEGYAAD
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Template Sequence  AAMLSDEKFVDNFLRESAMRLGKRHKHFTNGL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EVVGIKCLKNN
Template Known Secondary structure  TT
.....................................TT

B


S
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   319320.........330.........340.........350 .........360.
 
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Query Sequence  QYFVDPCKLLLTTPGIDAETGEYSDFGVPATILAHYL. RENGIVPE. . . . . . KCDLNSILFLLTPAESHEKLAQLVAMLA
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Template Sequence  AGLF. . . . CWMDLRPLLRESTFDSEM. . . . . SLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA. NMDDGTVDIALARIR
Template Known Secondary structure  SSS....
GGG
SSSS.....TS

GGGGT
SSSS
S.SS
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   362... ....370.........380... ......390.........400.........410...... ...420.........430.
 
   553.
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Query Sequence  QF
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Template Sequence  RF
Template Known Secondary structure 
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   432.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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