Return to main results Retrieve Phyre Job Id

Job DescriptionP21169
Confidence99.68%DateThu Jan 5 11:37:54 GMT 2012
Rank148Aligned Residues373
% Identity16%Templated1gdea_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  AACQYEENLLPPFYDTLTQYVEMGNSTFACPGHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVKLGDLLIHEGSAKD
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Template Sequence  ALSDRLELVSASEIRKLFDIAAGMKDVISL. . . . . GIGEPDFDTPQHIKEYAKEALDK. . . . . GLTHYGPNIGLLELREA
Template Known Secondary structure 
S



TT

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S

S


T.....T

S


TT

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   2.......10.........20.........30. ........40.........50.... .....60.........70.
 
   171........180.... .....190.........200.........210.........220.........230.........240......
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Query Sequence  AQKFAAKVFHADKT. . . . YFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEASRNPFGFIGG
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Template Sequence  IAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAP. AVILAGGKPVEVPTYEEDEFRL. .
Template Known Secondary structure 




TTTSSSTTTTT

TT
S

TT.T


GGGTT

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   72.......80.........90.........100.........110.........120...... ...130.........140........
 
   247..250.........260.........270.........280......... 290.........300.........310.........320...
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Query Sequence  IDAHCFNEEYLRQQIRDVAPEKADLPRPYRLAIIQLGTYDGTV. . . YNARQVIDTVGHLCDYILFDSAWVGYEQFIPMMA
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Template Sequence  . . . . . . NVDELKKYVTDKTRAL. . . . . . . . . IINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYE. HFIYD. . . D
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TT.........SS
TTT




TT

TTT.T
B
T...T
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   149150.........160.... .....170.........180.........190.........200... ..... .
 
   324.....330.........340.........350.........360.........370.........380.........390.........400...
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Query Sequence  DSSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKI
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Template Sequence  ARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI. . . . . . . . IERMVKFQMYNATCPVTFIQYAAAKALKDE
Template Known Secondary structure 




GGGSTT
GGGSTTTTT
GGG



........TTT
S

T
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   210.........220.........230.........240.........250. ........260.........270.........280.
 
   404.....410.........420.........430.........440.........450.........460.........470.........480...
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Query Sequence  HEGESGRRLWAECVEIGIEARKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFEPGAKWHGFEGYAADQYFV
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Template Sequence  RSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT






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   282.......290.........300.........310......
 
   484.....490.........500.........510...... ...520.........530.. .......540.........550........
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Query Sequence  DPCKLLLTTPGIDAETGEYSDFGVPATILAHYL. RENGIVPEKCDLNSIL. . . . FLLTPAESHEKLAQLVAMLAQFEQHI
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Template Sequence  GAFYIFPRI. . . . . . . . . . RDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVLKER
Template Known Secondary structure  BTT

B
..........GGGT

T

GGGG
GGGTTB

S
T
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   317..320..... ....330.........340.........350.........360.........370.........380......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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