Return to main results Retrieve Phyre Job Id

Job DescriptionP21169
Confidence99.87%DateThu Jan 5 11:37:54 GMT 2012
Rank49Aligned Residues351
% Identity16%Templated1bs0a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   103......110.........120..... ....130.........140.........150.........160......
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Query Sequence  FYDTLTQYVEMGNSTFACPGHQH. . . . . . . . . . . . . . . . GAFFKKHPAGRHFYDFFGENVFRADMCNADVKLGDLLIHEG
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Template Sequence  INAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIG. . SGGSGHVSGYSV
Template Known Secondary structure 

GGG







SB
SSSTT
S


TTSGGG

S
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SBTTTT


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   7..10.........20.........30.........40.........50.........60.........70.. .......80....
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
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Query Sequence  SAKDAQKFAAKVFHADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEASRNPFGFIGG
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Template Sequence  VHQALEEELAEWLGYSRALLF. ISGFAANQAVIAAMMAKEDRIAADRLSHASLLE. AASLSPSQLRRFAHN. . . . . . . . .
Template Known Secondary structure  T
S.S


TT
TT

.TSSS
TT.........
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   85....90.........100..... ....110.........120.........130........ .140.........150...
 
   247..250.........260.........270.........280..... ....290.........300.........310.........320....
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Query Sequence  IDAHCFNEEYLRQQIRDVAPEKADLPRPYRLAIIQLGTY. . DGTVYNARQVIDTVGHLCDYILFDSAWVGYEQFIPMMAD
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Template Sequence  . . . . . . DVTHLARLLASPCPGQQ. . . . . . . . MVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHG. . TGVIGEQGR
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S

SS
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TTT

B

TT

TTT..TTTSSGGG
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   154.....160.........170 .........180.........190.........200........ .210.......
 
   325....330.........340.........350.........360.........370.........380.........390.........400....
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Query Sequence  SSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIH
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Template Sequence  GSCWLQKVKPE. . . . LLVVTFGKGFGV. . SGAAVLCSST. . . . . . . . VADYLLQFARHLIYSTSMPPAQAQALRASLAVI
Template Known Secondary structure 
TT


S....SSSTTSS..


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SSB


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   218.220........ .230.........240 .........250 .........260.........270.........280...
 
   405....410.........420.........430.........440.........450.........460.........470.........480....
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Query Sequence  EGESGRRLWAECVEIGIEARKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFEPGAKWHGFEGYAADQYFVD
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Template Sequence  RSDEGDARREKLAALITRFRAGVQDL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PFTLADSCSAIQ.
Template Known Secondary structure  STTS.........................................S

S

SSB
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   284.....290.........300......... 310.........320.
 
   485....490.........500.........510.........520..... ....530.........540.........550...
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Query Sequence  PCKLLLTTPGIDAETGEYSDFGVPATILAHYLRENGIVPEK. . . . . . . CDLNSILFLLTPAESHEKLAQLVAMLAQ
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Template Sequence  . . . . PLIVGD. . . . . . . . . . . NSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHG
Template Known Secondary structure  ....
S...........TT


TTSS
TT


B

TT

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   322..... ..330.........340.........350.........360.........370.........380..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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