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Job DescriptionP21169
Confidence99.67%DateThu Jan 5 11:37:54 GMT 2012
Rank150Aligned Residues340
% Identity14%Templated1ax4a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   159160.........170.........180.........190.........200.... .....210.........220.........230..
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Query Sequence  GDLLIHEGSAKDAQKFAAKVFHADKTYFVLNGTSAANKVVTNALLT. . . . . . RGDLVLFDRNNHKSNHHGALIQAGATPV
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Template Sequence  DEAYAGSRNYYDLKDKAKELFNYDYIIPAHQG. RGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAI
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SSS



SS.TT

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   6970.........80.........90.........100 .........110.........120.........130.........140.......
 
   233......240.........250.........260.........270.........280.........290 .........300.........
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Query Sequence  YLEASRNPFGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPYRLAIIQLGTYDGTVY. . . NARQVIDTVGHLCDYILFD
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Template Sequence  NIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNI. . . . VAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMD
Template Known Secondary structure 
B
GGGG
TTS

TTTT
B

GGG....SSBTTTTSB


T

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   148.150.........160.........170.........180.... .....190.........200.........210.........220...
 
   310... ... ...320.........330.........340.........350.........360.........370.........380
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Query Sequence  SAWV. . . GYE. . . . . . QFIPMMADSSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIRGQARFCPHKRLNNA
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Template Sequence  SARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD. . . . ALTMSAKDPLLNIG. . GLVAIRDNE. . . . . . . . EIFTLARQ
Template Known Secondary structure 
TT
GGGTT

GGG
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   224.....230.........240.........250........ .260.........270.. .......280. ........
 
   381........390.........400........ .410.........420.........430.........440.........450........
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Query Sequence  FMLHASTSPFYPLFAALDVNAKIHEGES. . GRRLWAECVEIGIEARKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASD
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Template Sequence  RCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREA. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T
STTTTT

TT
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   291........300.........310.........320.........330.........340..
 
   459460.........470.........480.........490.........500.........510...... ...520...
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Query Sequence  RRFFSFEPGAKWHGFEGYAADQYFVDPCKLLLTTPGIDAETGEYSDFGVPATILAHYL. RENGIVP. . . . . . . . . . . . . .
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Template Sequence  . . . . . . . . . . . . . GIPIQYPTGGHAVFVDCKKLVPQI. . . . . . . PGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPAT
Template Known Secondary structure  .............T

B
SS

SSSTTT
TTS.......
GGG


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   343......350.........360...... ...370.........380.........390.........400..
 
   524.....530......... 540.........550.........560.....
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Query Sequence  . . . EKCDLNSILFLLTPAE. SHEKLAQLVAMLAQFEQHIEDDSPLV
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Template Sequence  GEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFATLKGLE
Template Known Secondary structure 
SB


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TTSS
TTTT


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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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