Job Description P21169 Confidence 99.53% Date Thu Jan 5 11:37:54 GMT 2012 Rank 198 Aligned Residues 310 % Identity 15% Template c3t18D_ PDB info PDB header:transferase Chain: D: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of aminotransferase from anaerococcus prevotii dsm2 20548. Resolution 2.86 Å

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		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		K	D	A	Q	K	F	A	A	K	V	F	H	A	D	K	T	Y	.	.	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	L	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	I	Q	A	G	A	T	P	V	Y	L	E	A	S	R	N	P	F	G	F	I	G	G
Query Conservation																			.	.
Alig confidence																			.	.																																					.																						.	.	.
Template Conservation																																																									.																						.	.	.
Template Sequence		K	I	V	I	D	T	L	F	G	P	Y	K	P	E	G	Y	I	S	A	I	A	T	P	G	G	T	G	A	I	R	S	A	I	F	S	Y	L	D	E	G	D	P	L	I	C	H	D	Y	Y	W	A	P	Y	R	K	.	I	C	E	E	F	G	R	N	F	K	T	F	E	F	F	T	D	D	F	A	F	.	.	.
Template Known Secondary structure										G	G	G			S	S								S													T	S		S	S							S	S			T					.						T									B		S	S	S	S	B	.	.	.
Template Predicted Secondary structure																																																									.																						.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.							.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																							.								.	.	.												.	.	.	.	.	.
Query SS confidence																																							.								.	.	.												.	.	.	.	.	.
Query Sequence		I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	.	T	Y	D	G	T	V	Y	.	.	.	N	A	R	Q	V	I	D	T	V	G	H	.	.	.	.	.	.	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E
Query Conservation																																							.								.	.	.												.	.	.	.	.	.
Alig confidence		.	.																						.	.	.	.	.	.	.	.							.								.	.	.												.	.	.	.	.	.														.
Template Conservation		.	.																						.	.	.	.	.	.	.	.																																																.
Template Sequence		.	.	N	I	D	V	Y	K	E	A	I	D	E	G	I	R	D	S	D	R	I	A	S	.	.	.	.	.	.	.	.	L	I	N	S	P	G	N	N	P	T	G	Y	S	L	S	D	E	E	W	D	E	V	I	T	F	L	K	E	K	A	E	D	K	D	K	K	I	T	L	I	V	D	V	A	Y	L	E	.	F
Template Known Secondary structure		.	.															S		S					.	.	.	.	.	.	.	.					S	S		T	T	T														T	T	T	T	T	T	T	T	S	T	T										T	T		T	.	T
Template Predicted Secondary structure		.	.																						.	.	.	.	.	.	.	.																																																.
Template SS confidence
				159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.									180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.			350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		Q	F	I	P	M	M	A	D	S	S	P	L	L	L	E	L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	.	.	A	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C	P	H	K	R	L	N	N	A	F	M	L	H	A	S	T	S	P	F	Y	P	L	F
Query Conservation																																			.	.
Alig confidence																																			.	.																.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.
Template Sequence		A	G	D	G	D	Q	Q	R	K	F	F	E	K	F	S	N	L	P	R	N	L	F	V	V	V	A	F	S	X	S	K	S	H	T	A	Y	G	L	R	S	G	A	A	V	G	I	S	S	S	K	.	.	.	.	.	.	.	E	I	I	E	E	F	E	A	S	L	A	H	S	A	R	C	N	W	S	N	G	T	H
Template Known Secondary structure		S	S	S	S	S	S	S	S	T	T	T	G	G	G	S	S			T	T														T		G	G	G										S			.	.	.	.	.	.	.																		T	S	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.								.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	D	V	N	A	K	I	H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T	S	V	L	A	S	D	R	R	F	F	S	F	E	P	G	A	K	W	H	G	F	E
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	Q	N	I	L	I	E	L	E	R	A	E	N	K	K	I	Y	E	Q	E	L	V	D	L	R	N	X	L	K	S	R	A	D	V	F	V	T	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	N	K	L	T
Template Known Secondary structure					T	T	T	S	S	T	T	S	G	G	G	T	T																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340																																			.	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	A	A	D	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	R	E	N	G	I	V	P	E	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E	S	H	E	K	L	A	Q	L	V	A	M	L	A	Q	F
Query Conservation
Alig confidence											.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.													.
Template Conservation											.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.													.
Template Sequence		X	I	P	Y	F	G	G	F	F	.	.	.	.	T	F	I	P	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	F	D	I	V	K	D	L	E	K	E	N	I	F	T	.	I	P	S	A	K	G	I	R	V	A	I	C	.	G	V	G	E	E	K	I	P	K	L	V	Q	R	L	A	F	Y
Template Known Secondary structure							S	S	S		.	.	.	.						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	T				.				S	S						S	T	.	T	S		T	T	T
Template Predicted Secondary structure											.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.													.
Template SS confidence
		347	.	.	350	.	.	.	.	.					.	.	.	.	360	.															.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions