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Job DescriptionP21169
Confidence99.89%DateThu Jan 5 11:37:54 GMT 2012
Rank39Aligned Residues324
% Identity12%Templatec3nnkC_
PDB info PDB header:transferaseChain: C: PDB Molecule:ureidoglycine-glyoxylate aminotransferase; PDBTitle: biochemical and structural characterization of a ureidoglycine2 aminotransferase in the klebsiella pneumoniae uric acid catabolic3 pathway
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   167..170.........180... ......190.........200.........210.........220.........230.........240....
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Query Sequence  SAKDAQKFAAKVFHADK. . TYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEASRNPFGFI
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Template Sequence  YMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHLL. CEIARRCRAEVHTIEVPWGEVF
Template Known Secondary structure  T


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   47..50.........60.........70.........80.........90.........100... ......110.........120.....
 
   245....250.........260.........270.........280.........290.........300.........310.........320....
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Query Sequence  GGIDAHCFNEEYLRQQIRDVAPEKADLPRPYRLAIIQLGTYDGTVYNARQVIDTVGHLCDYILFDSAWVGYEQFIPMMAD
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Template Sequence  . . . . . . . . TPDQVEDAVKRIRPRLL. . . . . . . . LTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLG. . . . . . . . G
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TTTBT........T
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   126...130.........140.. .......150.........160.........170.........180 .
 
   325....330.........340.........350.........360... ......370.........380
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Query Sequence  SSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDN. . . . . . . . . . . . . . . . . . . . . . . . HIRGQARFCPHKRLNNA
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Template Sequence  NPLETDVWGLD. . . . AVSAG. MQCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDY
Template Known Secondary structure  B


TTTTT
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   182.......190.. ..... ..200.........210.........220.........230.........240.........250......
 
   381 ........390.........400.........410.........420.........430.........440.........450........
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Query Sequence  F. . MLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVEIGIEARKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASD
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Template Sequence  WGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  STT


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   258.260.........270.........280.........290.........300.........
 
   459460.........470.........480.........490.........500.........510...... ...520.... .....530..
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Query Sequence  RRFFSFEPGAKWHGFEGYAADQYFVDPCKLLLTTPGIDAETGEYSDFGVPATILAHYL. RENGIVPE. . . . . KCDLNSIL
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Template Sequence  . . . . . . . . . . . . . GLETFGDLKHKMNNV. LGVVIPQ. . . . . . . . . . . GINGDQARKLMLEDFGIEIGTSFGPLHGKVWRI
Template Known Secondary structure  .............T

B
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GGGB
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GGGTTT
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   310.........320.... .....330. ........340.........350.........360....
 
   533......540.........550.........560.........570...
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Query Sequence  FLLTPAESHEKLAQLVAMLAQFEQHIEDDSPLVEVLPSVYN
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Template Sequence  GTMGYNARKDCVMTTLSALEAVLNYLKFPTTQGAAMQAAWD
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GGG
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   365....370.........380.........390.........400.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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