Job Description P21169 Confidence 99.74% Date Thu Jan 5 11:37:54 GMT 2012 Rank 115 Aligned Residues 217 % Identity 13% Template c3ndnC_ PDB info PDB header:lyase Chain: C: PDB Molecule:o-succinylhomoserine sulfhydrylase; PDBTitle: crystal structure of o-succinylhomoserine sulfhydrylase from2 mycobacterium tuberculosis covalently bound to pyridoxal-5-phosphate Resolution 1.85 Å

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		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		K	D	A	Q	K	F	A	A	K	V	F	H	A	D	K	T	Y	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	L	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	.	.	.	.	N	H	H	G	A	L	I	Q	A	G	A	T	P	V	Y	L	E	A	S	R	N	P	F	G	F	I
Query Conservation																																																				.	.	.	.
Alig confidence																								.																												.	.	.	.				.																.	.	.	.	.	.	.
Template Conservation																								.																																			.																.	.	.	.	.	.	.
Template Sequence		S	V	F	E	E	R	L	R	L	I	E	G	A	P	A	A	F	A	T	A	S	G	.	M	A	A	V	F	T	S	L	G	A	L	L	G	A	G	D	R	L	V	A	A	R	S	L	F	G	S	C	F	V	V	C	S	E	.	I	L	P	R	W	G	V	Q	T	V	F	V	D	G	D	.	.	.	.	.	.	.
Template Known Secondary structure													T		S						S	S		.										T	T			T	T							S	S											T	.					T	T								T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.																																			.																.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		G	G	I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	.	T	Y	D	G	T	V	Y	N	A	R	Q	V	I	D	T	V	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	A
Query Conservation																																									.
Alig confidence		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.							.																																						.	.	.
Template Conservation		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																																													.	.	.
Template Sequence		.	.	.	.	.	.	.	.	D	L	S	Q	W	E	R	A	L	S	V	P	T	Q	A	.	.	.	.	.	.	.	.	.	.	V	F	F	E	T	P	S	N	P	M	Q	S	L	V	D	I	A	A	V	T	E	L	A	H	A	A	G	A	K	V	V	L	D	N	V	F	A	T	P	L	L	Q	Q	G	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.									T	T	S			S		.	.	.	.	.	.	.	.	.	.					S	S		T	T	T																T	T								T	T	T								.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																																													.	.	.
Template SS confidence
										147	.	.	150	.	.	.	.	.	.	.	.	.	160	.											.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390				.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		D	S	S	P	L	L	L	E	L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C	P	H	K	R	L	N	N	A	F	M	L	H	A	S	T	S	P	F	.	.	.	Y	P	L	F	A	A	L	D	V	N
Query Conservation																																																																					.	.	.
Alig confidence		.	.	.	.	.	.							.	.	.	.																										.	.	.	.	.	.	.																				.	.	.
Template Conservation		.	.	.	.	.	.							.	.	.	.																										.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	F	P	L	G	V	D	.	.	.	.	V	V	V	Y	S	G	T	H	I	D	G	Q	G	R	V	L	G	G	A	I	L	G	D	R	E	.	.	.	.	.	.	.	Y	I	D	G	P	V	Q	K	L	M	R	H	T	G	P	A	M	S	A	F	N	A	W	V	L	L	K	G	L	E	T	L
Template Known Secondary structure		.	.	.	.	.	.	G	G	G	T		S	.	.	.	.										S		S	S													.	.	.	.	.	.	.				T
Template Predicted Secondary structure		.	.	.	.	.	.							.	.	.	.																										.	.	.	.	.	.	.
Template SS confidence
								206	.	.	.	210	.					.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.								.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	I	H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.
Template Sequence		A	I	R	V	Q	.	.	.	.	.	.	.	.	.	H	S	N	A	S	A	Q	R	I	A	E	F	L	N	G	H	P	S	V	R	W	V	R	Y	P	Y	L
Template Known Secondary structure							.	.	.	.	.	.	.	.	.															T		T	T							T	T	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.										.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions