Job Description P21169 Confidence 99.93% Date Thu Jan 5 11:37:54 GMT 2012 Rank 23 Aligned Residues 296 % Identity 14% Template c3mafB_ PDB info PDB header:lyase Chain: B: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of stspl (asymmetric form) Resolution 2.97 Å

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		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.									.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.																			.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.																			.	.	.	.	.	.	.	.
Query Sequence		K	D	A	Q	K	F	A	A	K	V	F	H	A	D	K	T	Y	.	.	.	.	.	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	L	.	.	.	.	.	.	.	.	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	I	Q	A	G	A	T	P	V	Y	L	E
Query Conservation																			.	.	.	.	.																			.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.																			.	.	.	.	.	.	.	.																			.
Template Conservation																																																																				.
Template Sequence		A	E	V	V	A	M	T	A	H	M	L	G	G	D	A	A	G	G	T	V	C	G	T	V	T	S	G	G	T	E	S	L	L	L	A	M	K	T	Y	R	D	W	A	R	A	T	K	G	I	T	A	P	E	A	V	V	P	V	S	A	H	A	A	F	D	K	.	A	A	Q	Y	F	G	I	K	L	V	R	T	P
Template Known Secondary structure												T	T	T	T	T	T	T	S								S	S																							S	S							T	T	S		T					.						T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		A	S	R	N	P	F	G	F	I	G	G	I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	T	Y	D	.	G	T	V	Y	N	A	R	Q	V	I	D	T	V	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G
Query Conservation																																																					.
Alig confidence							.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.										.
Template Conservation							.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	A	D	Y	.	.	.	.	.	.	.	.	.	.	R	A	D	V	A	A	M	R	E	A	I	T	P	N	T	V	V	.	.	.	.	.	.	.	.	.	.	V	A	G	S	A	P	G	Y	P	H	G	V	V	D	P	I	P	E	I	A	A	L	A	A	E	H	G	I	G	C	H	V	D	A	C	L	G	G
Template Known Secondary structure		B		T	T	S	.	.	.	.	.	.	.	.	.	.	S	B											T	T				.	.	.	.	.	.	.	.	.	.					T	T		T	T	T																	T								T	T	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.											.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.											.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.				.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		Y	E	Q	F	I	P	M	M	A	D	S	S	P	L	L	L	E	L	.	.	.	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C	P	H	K	R	L	N	N	A	F	M	L	H	A	S	T	S	P	F	Y
Query Conservation																				.	.	.
Alig confidence																				.	.	.				.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	I	L	P	W	A	E	R	L	G	Y	P	V	P	P	F	D	F	R	L	E	G	V	T	.	.	.	.	S	V	S	A	D	T	H	K	Y	G	Y	G	A	K	G	T	S	V	I	L	Y	R	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	L	H	Y	Q	Y	F	I	A	A	D	W
Template Known Secondary structure		T	T						T	T	T							S	T	T	S	T	T			.	.	.	.						T	T	T	T	T				S	S							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S
Template Predicted Secondary structure																										.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.					.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.																.	.	330	.	.	.	.	.	.	.	.	.	340
																		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	F	A	A	L	D	V	N	A	K	I	H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T	S	V	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	G	L	Y	F	S	P	T	F	A	G	S	R	P	G	A	L	S	A	T	A	W	A	A	M	L	S	L	G	E	E	G	Y	L	D	A	T	R	R	I	L	Q	A	A	D	R	L	K	A	G	V	R	A	I	P	S	L	K	I	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T						S	S	S		S	S																																									T	S	T	T				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.		.	.	.	.	.	530	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		A	S	D	R	R	F	F	S	F	E	P	G	A	K	W	H	G	F	E	G	Y	A	A	D	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	R	E	N	G	I	V	P	E	.	K	C	D	L	N	S	I	L	F	L
Query Conservation																																																																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	L	W	V	I	A	.	.	.	.	.	.	.	.	.	.	.	V	A	S	D	E	L	N	I	Y	Q	V	M	E	E	M	A	G	R	G	W	R	L	N	G	L	H	R	P	P	A	F	H	V	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S				.	.	.	.	.	.	.	.	.	.	.				S	S	S												T	T							T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																														403	.	.	.	.	.	.												410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
		535	.	.	.	.		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		L	T	P	A	E	.	S	H	E	K	L	A	Q	L	V	A	M	L	A	Q	F	E	Q	H	I	E	D	D
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		L	T	L	R	H	T	E	P	G	V	V	D	R	F	L	A	D	L	Q	D	A	V	A	Q	V	R	A	H
Template Known Secondary structure				G	G	G	S	S	T	T																		T
Template Predicted Secondary structure
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions