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Job DescriptionP21169
Confidence99.84%DateThu Jan 5 11:37:54 GMT 2012
Rank62Aligned Residues327
% Identity15%Templatec3lwsF_
PDB info PDB header:lyaseChain: F: PDB Molecule:aromatic amino acid beta-eliminating PDBTitle: crystal structure of putative aromatic amino acid beta-2 eliminating lyase/threonine aldolase. (yp_001813866.1) from3 exiguobacterium sp. 255-15 at 2.00 a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120.........130.........140.........150.........160.........170.........180.........190......
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Query Sequence  TFACPGHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVKLGDLLIHEGSAKDAQKFAAKVFHADKTYFVLNGTSAANK
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Template Sequence  TGQISGHGK. . . . . . . . . . . . . . RNVGVLKTAFAAV. ADEXASDQYGTGAIIEPFEQKFADVLGXDDAVFFPSGTXAQQV
Template Known Secondary structure  SSSBSS
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   12.......20 .........30... ......40.........50.........60.........70......
 
   197..200....... ..210.........220.. .......230.........240.........250.........260.........270...
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Query Sequence  VVTNALLTRGD. LVLFDRNNHKSNHHG. . ALIQAGATPVYLEASRNPFGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPR
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Template Sequence  ALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHPIETILVGAA. . . . . . . . . . . DRLXTLDEIKALPDIACLL. . . . . .
Template Known Secondary structure  T


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   77..80.........90.........100.........110.........120 .........130.........
 
   274.....280......... 290.........300.........310.........320.........330.........340.........350
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Query Sequence  PYRLAIIQLGTYDGTV. . . YNARQVIDTVGHLCDYILFDSAWVGYEQFIPMMADSSPLLLELNENDPGIFVTQSVHKQQA
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Template Sequence  . . . . LELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEXLPYY. . . EKTAAEIAGLFD. . . . SIYISFYGLGG
Template Known Secondary structure  ....SSBGGGTSB


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   140.........150.........160.........170.........180..... ....190....... ..200........
 
   351........360.........370.........380.........390.........400.........410.........420.........430
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Query Sequence  GFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVEIGIEARKAILAR
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Template Sequence  I. . AGAILAGPAA. . . . . . . . FCQTARIWKRRYGGDLISLYPYIVSADYYYELRKDR. . . . . XGQYYEQAKQLAEQFNAL
Template Known Secondary structure  S..S

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   210 .........220 .........230.........240.........250...... ...260.........270....
 
   431........440.........450.........460.........470.........480.........490.........500.........510
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Query Sequence  CKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFEPGAKWHGFEGYAADQYFVDPCKLLLTTPGIDAETGEYSDFGVPAT
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Template Sequence  PGVHTTPEVP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VSNXFHLHFD. . . . . . . . . GQAADISP
Template Known Secondary structure  TTSSS
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   275....280.... .....290.... .....300..
 
   511........520... ......530........ .540.........550...
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Query Sequence  ILAHYLRENGIVP. . . EKCDLNSILFLLTPA. . . . . ESHEKLAQLVAMLAQ
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Template Sequence  KLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQ
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   303......310.........320.........330.........340.........350...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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