Job Description P21169 Confidence 27.76% Date Thu Jan 5 11:37:54 GMT 2012 Rank 403 Aligned Residues 50 % Identity 10% Template c3ktsA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 Resolution 2.75 Å

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		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	T	Y	D	G	T	V	Y	N	A	R	Q	V	I	D	T	V	G	H	L	C	D	Y	I	L	F	D
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.						.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.						.	.	.	.
Template Sequence		S	I	I	P	A	A	H	N	Q	K	D	M	E	K	I	L	E	L	D	L	T	Y	.	.	.	.	.	.	.	.	.	.	M	V	M	L	E	.	.	.	.	T	H	V	A	Q	L	K	A	L	V	K	Y	A	Q	A	G	G	K	K	V	L	L	H
Template Known Secondary structure								S	S	S							T	T	S	S				.	.	.	.	.	.	.	.	.	.					S	.	.	.	.			T	T	T											T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.						.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30											.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions