Job Description P21169 Confidence 99.71% Date Thu Jan 5 11:37:54 GMT 2012 Rank 135 Aligned Residues 292 % Identity 14% Template c3h14A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative aminotransferase from silicibacter2 pomeroyi Resolution 1.90 Å

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		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		K	D	A	Q	K	F	A	A	K	V	F	H	A	D	K	T	.	.	.	Y	F	V	L	N	G	T	S	A	A	N	K	V	V	T	N	A	L	L	T	R	G	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	I	Q	A	G	A	T	P	V	Y	L	E	A	S	R	N	P	F	G	F	I	G
Query Conservation																		.	.	.
Alig confidence																		.	.	.																																						.																							.
Template Conservation																																																										.																							.
Template Sequence		Q	R	I	A	R	L	Y	G	E	W	Y	G	V	D	L	D	P	G	R	V	V	I	T	P	G	S	S	G	G	F	L	L	A	F	T	A	L	F	D	S	G	D	R	V	G	I	G	A	P	G	Y	P	S	Y	R	Q	.	I	L	R	A	L	G	L	V	P	V	D	L	P	T	A	P	E	N	R	L	Q	P	.
Template Known Secondary structure																		G	G	G					S	S															T	T								S								.					T	T										G	G	G	T	T	S		.
Template Predicted Secondary structure																																																										.																							.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																												.	.	.	.
Query SS confidence																																												.	.	.	.
Query Sequence		G	I	D	A	H	C	F	N	E	E	Y	L	R	Q	Q	I	R	D	V	A	P	E	K	A	D	L	P	R	P	Y	R	L	A	I	I	Q	L	G	T	Y	D	G	.	.	.	.	T	V	Y	N	A	R	Q	V	I	D	T	V	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M
Query Conservation																																												.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.																										.								.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.								.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	A	D	F	A	G	L	D	L	A	G	L	X	V	A	S	P	A	N	P	T	G	T	X	L	D	H	A	A	X	G	A	L	I	E	A	A	Q	A	Q	G	A	S	F	I	S	D	E	I	Y	.	H	G	I	E	Y	E	A	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	S			S						S	S		T	T	T																			T	T								T	T	.	T	T		B	S	S	S	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.								.
Template SS confidence
																						153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		M	A	D	S	S	P	L	L	L	E	L	N	E	N	D	P	G	I	F	V	T	Q	S	V	H	K	Q	Q	A	.	G	F	S	Q	T	S	Q	I	H	K	K	D	N	H	I	R	G	Q	A	R	F	C	P	H	K	R	L	N	N	A	F	M	L	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	D	V	N
Query Conservation																															.
Alig confidence		.	.													.	.	.	.												.															.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation		.	.													.	.	.	.																											.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		.	.	K	A	V	T	A	L	E	L	T	D	E	C	.	.	.	.	Y	V	I	N	S	F	S	K	Y	F	S	X	T	G	W	R	V	G	W	X	V	V	P	E	D	Q	.	.	.	.	.	.	.	.	.	V	R	V	V	E	R	I	A	Q	N	X	F	I	C	A	P	H	.	.	.	.	A	S	Q	V	A	A
Template Known Secondary structure		.	.					G	G	G	T		S	S	S	.	.	.	.						S	S	S	T	T			T	T	S									G	G	G	.	.	.	.	.	.	.	.	.											T	T						.	.	.	.
Template Predicted Secondary structure		.	.													.	.	.	.																											.	.	.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
				211	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.										.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.					.	.	.	.	270	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	I	H	E	G	E	S	G	R	R	L	W	A	E	C	V	E	I	G	I	E	A	R	K	A	I	L	A	R	C	K	L	F	R	P	F	I	P	P	V	V	D	G	K	L	W	Q	D	Y	P	T	S	V	L	A	S	D	R	R	F	F	S	F	E	P	G	A	K	W	H	G	F	E	G	Y	A	A	D	Q
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	A	L	D	C	D	A	E	L	Q	A	N	L	D	V	Y	K	A	N	R	K	L	X	L	E	R	L	P	K	A	G	F	T	R	I	A	P	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T																											T				B					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.		.	.	.	520	.	.	.	.	.	.	.	.	.	530	.						.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure																																						.																.	.	.	.	.
Query SS confidence																																						.																.	.	.	.	.
Query Sequence		Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	E	T	G	E	Y	S	D	F	G	V	P	A	T	I	L	A	H	Y	L	.	R	E	N	G	I	V	P	E	K	C	D	L	N	S	I	.	.	.	.	.	L	F	L	L	T	P	A	E	S	H	E	K	L	A	Q	L	V	A	M	L	A	Q	F
Query Conservation																																						.																.	.	.	.	.
Alig confidence		.	.	.										.	.	.	.	.	.	.	.	.	.															.																.	.	.	.	.
Template Conservation		.	.	.										.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	G	A	F	Y	V	Y	A	D	V	.	.	.	.	.	.	.	.	.	.	S	D	L	T	D	D	S	R	A	F	A	A	E	I	L	E	K	A	G	V	A	V	T	P	G	L	D	F	D	P	E	R	G	A	G	T	L	R	F	S	Y	A	R	A	T	A	D	I	E	E	G	L	D	R	L	E	A	F
Template Known Secondary structure		.	.	.	B	T	T							.	.	.	.	.	.	.	.	.	.	T	T	T		S																				G	G	G	T		T	T	T	G	G	G								S
Template Predicted Secondary structure		.	.	.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
					312	.	.	.	.	.	.	.	320											.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		555	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		379	380

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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